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BioBlend.objects: metacomputing with Galaxy.
Leo, Simone; Pireddu, Luca; Cuccuru, Gianmauro; Lianas, Luca; Soranzo, Nicola; Afgan, Enis; Zanetti, Gianluigi.
Affiliation
  • Leo S; CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruder Boskovic Institute, 10000 Zagreb, Croatia CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruder Boskovic Institute,
  • Pireddu L; CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruder Boskovic Institute, 10000 Zagreb, Croatia CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruder Boskovic Institute,
  • Cuccuru G; CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruder Boskovic Institute, 10000 Zagreb, Croatia.
  • Lianas L; CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruder Boskovic Institute, 10000 Zagreb, Croatia.
  • Soranzo N; CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruder Boskovic Institute, 10000 Zagreb, Croatia.
  • Afgan E; CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruder Boskovic Institute, 10000 Zagreb, Croatia.
  • Zanetti G; CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruder Boskovic Institute, 10000 Zagreb, Croatia.
Bioinformatics ; 30(19): 2816-7, 2014 Oct.
Article in En | MEDLINE | ID: mdl-24928211
ABSTRACT

SUMMARY:

BioBlend.objects is a new component of the BioBlend package, adding an object-oriented interface for the Galaxy REST-based application programming interface. It improves support for metacomputing on Galaxy entities by providing higher-level functionality and allowing users to more easily create programs to explore, query and create Galaxy datasets and workflows. AVAILABILITY AND IMPLEMENTATION BioBlend.objects is available online at https//github.com/afgane/bioblend. The new object-oriented API is implemented by the galaxy/objects subpackage.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Computational Biology Language: En Journal: Bioinformatics Journal subject: INFORMATICA MEDICA Year: 2014 Document type: Article
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Add to My VHL
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Computational Biology Language: En Journal: Bioinformatics Journal subject: INFORMATICA MEDICA Year: 2014 Document type: Article