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Peripheral infrastructure vectors and an extended set of plant parts for the Modular Cloning system.
Gantner, Johannes; Ordon, Jana; Ilse, Theresa; Kretschmer, Carola; Gruetzner, Ramona; Löfke, Christian; Dagdas, Yasin; Bürstenbinder, Katharina; Marillonnet, Sylvestre; Stuttmann, Johannes.
Affiliation
  • Gantner J; Institute for Biology, Department of Plant Genetics, Martin Luther University Halle (Saale), Halle, Germany.
  • Ordon J; Institute for Biology, Department of Plant Genetics, Martin Luther University Halle (Saale), Halle, Germany.
  • Ilse T; Institute for Biology, Department of Plant Genetics, Martin Luther University Halle (Saale), Halle, Germany.
  • Kretschmer C; Institute for Biology, Department of Plant Genetics, Martin Luther University Halle (Saale), Halle, Germany.
  • Gruetzner R; Department of Cell and Metabolic Biology, Leibniz Institute of Plant Biochemistry, Halle (Saale), Germany.
  • Löfke C; Gregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria.
  • Dagdas Y; Gregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria.
  • Bürstenbinder K; Department of Molecular Signal Processing, Leibniz Institute of Plant Biochemistry, Halle (Saale), Germany.
  • Marillonnet S; Department of Cell and Metabolic Biology, Leibniz Institute of Plant Biochemistry, Halle (Saale), Germany.
  • Stuttmann J; Institute for Biology, Department of Plant Genetics, Martin Luther University Halle (Saale), Halle, Germany.
PLoS One ; 13(5): e0197185, 2018.
Article in En | MEDLINE | ID: mdl-29847550
Standardized DNA assembly strategies facilitate the generation of multigene constructs from collections of building blocks in plant synthetic biology. A common syntax for hierarchical DNA assembly following the Golden Gate principle employing Type IIs restriction endonucleases was recently developed, and underlies the Modular Cloning and GoldenBraid systems. In these systems, transcriptional units and/or multigene constructs are assembled from libraries of standardized building blocks, also referred to as phytobricks, in several hierarchical levels and by iterative Golden Gate reactions. Here, a toolkit containing further modules for the novel DNA assembly standards was developed. Intended for use with Modular Cloning, most modules are also compatible with GoldenBraid. Firstly, a collection of approximately 80 additional phytobricks is provided, comprising e.g. modules for inducible expression systems, promoters or epitope tags. Furthermore, DNA modules were developed for connecting Modular Cloning and Gateway cloning, either for toggling between systems or for standardized Gateway destination vector assembly. Finally, first instances of a "peripheral infrastructure" around Modular Cloning are presented: While available toolkits are designed for the assembly of plant transformation constructs, vectors were created to also use coding sequence-containing phytobricks directly in yeast two hybrid interaction or bacterial infection assays. The presented material will further enhance versatility of hierarchical DNA assembly strategies.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Plant Proteins / Plasmids / Nicotiana / Genetic Engineering / Cloning, Molecular / Genetic Vectors Language: En Journal: PLoS One Journal subject: CIENCIA / MEDICINA Year: 2018 Document type: Article Affiliation country: Country of publication:

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Plant Proteins / Plasmids / Nicotiana / Genetic Engineering / Cloning, Molecular / Genetic Vectors Language: En Journal: PLoS One Journal subject: CIENCIA / MEDICINA Year: 2018 Document type: Article Affiliation country: Country of publication: