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Mikania micrantha genome provides insights into the molecular mechanism of rapid growth.
Liu, Bo; Yan, Jian; Li, Weihua; Yin, Lijuan; Li, Ping; Yu, Hanxia; Xing, Longsheng; Cai, Minling; Wang, Hengchao; Zhao, Mengxin; Zheng, Jin; Sun, Feng; Wang, Zhenzhen; Jiang, Zhaoyang; Ou, Qiaojing; Li, Shubin; Qu, Lu; Zhang, Qilei; Zheng, Yaping; Qiao, Xi; Xi, Yu; Zhang, Yan; Jiang, Fan; Huang, Cong; Liu, Conghui; Ren, Yuwei; Wang, Sen; Liu, Hangwei; Guo, Jianyang; Wang, Haihong; Dong, Hui; Peng, Changlian; Qian, Wanqiang; Fan, Wei; Wan, Fanghao.
Affiliation
  • Liu B; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Yan J; Key Laboratory of Agro-Environment in the Tropics, Ministry of Agriculture and Rural Affairs; Guangdong Provincial Key Laboratory of Eco-Circular Agriculture; College of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642, China.
  • Li W; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Yin L; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Li P; Key Laboratory of Protein Function and Regulation in Agricultural Organisms of Guangdong province, College of Life Science, South China Agricultural University, Guangzhou, 510642, China.
  • Yu H; Key Laboratory of Agro-Environment in the Tropics, Ministry of Agriculture and Rural Affairs; Guangdong Provincial Key Laboratory of Eco-Circular Agriculture; College of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642, China.
  • Xing L; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Cai M; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Wang H; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Zhao M; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Zheng J; The Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
  • Sun F; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Wang Z; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Jiang Z; Key Laboratory of Agro-Environment in the Tropics, Ministry of Agriculture and Rural Affairs; Guangdong Provincial Key Laboratory of Eco-Circular Agriculture; College of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642, China.
  • Ou Q; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Li S; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Qu L; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Zhang Q; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Zheng Y; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Qiao X; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China.
  • Xi Y; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Zhang Y; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Jiang F; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Huang C; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Liu C; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Ren Y; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Wang S; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Liu H; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Guo J; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China.
  • Wang H; The Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
  • Dong H; Key Laboratory of Protein Function and Regulation in Agricultural Organisms of Guangdong province, College of Life Science, South China Agricultural University, Guangzhou, 510642, China.
  • Peng C; Fairy Lake Botanical Garden, Shenzhen and Chinese Academy of Sciences, Shenzhen, 518004, China.
  • Qian W; Institute of Ecological Science, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development; Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring; School of Life Science, South China Normal University, Guangzhou, 510631, China. pengchl@scib.ac.cn.
  • Fan W; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China. qianwanqiang@caas.cn.
  • Wan F; Guangdong Laboratory of Lingnan Modern Agriculture, Shenzhen; Genome Analysis Laboratory of the Ministry of Agriculture; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518120, China. fanwei@caas.cn.
Nat Commun ; 11(1): 340, 2020 01 17.
Article in En | MEDLINE | ID: mdl-31953413
ABSTRACT
Mikania micrantha is one of the top 100 worst invasive species that can cause serious damage to natural ecosystems and substantial economic losses. Here, we present its 1.79 Gb chromosome-scale reference genome. Half of the genome is composed of long terminal repeat retrotransposons, 80% of which have been derived from a significant expansion in the past one million years. We identify a whole genome duplication event and recent segmental duplications, which may be responsible for its rapid environmental adaptation. Additionally, we show that M. micrantha achieves higher photosynthetic capacity by CO2 absorption at night to supplement the carbon fixation during the day, as well as enhanced stem photosynthesis efficiency. Furthermore, the metabolites of M. micrantha can increase the availability of nitrogen by enriching the microbes that participate in nitrogen cycling pathways. These findings collectively provide insights into the rapid growth and invasive adaptation.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome, Plant / Mikania Type of study: Prognostic_studies Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2020 Document type: Article Affiliation country: Publication country: ENGLAND / ESCOCIA / GB / GREAT BRITAIN / INGLATERRA / REINO UNIDO / SCOTLAND / UK / UNITED KINGDOM

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome, Plant / Mikania Type of study: Prognostic_studies Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2020 Document type: Article Affiliation country: Publication country: ENGLAND / ESCOCIA / GB / GREAT BRITAIN / INGLATERRA / REINO UNIDO / SCOTLAND / UK / UNITED KINGDOM