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An in silico hybrid continuum-/agent-based procedure to modelling cancer development: Interrogating the interplay amongst glioma invasion, vascularity and necrosis.
de Montigny, Jean; Iosif, Alexandros; Breitwieser, Lukas; Manca, Marco; Bauer, Roman; Vavourakis, Vasileios.
Affiliation
  • de Montigny J; Biosciences Institute, Newcastle University, Newcastle Upon Tyne, UK. Electronic address: j.de-montigny2@newcastle.ac.uk.
  • Iosif A; Department of Mechanical & Manufacturing Engineering, University of Cyprus, Nicosia, Cyprus. Electronic address: iosif.alexandros@ucy.ac.cy.
  • Breitwieser L; CERN, European Organization for Nuclear Research, Geneva, Switzerland; ETH Zürich, Swiss Federal Institute of Technology in Zurich, Zurich, Switzerland. Electronic address: lukas.breitwieser@cern.ch.
  • Manca M; SCImPULSE Foundation, Geleen, Netherlands. Electronic address: marco@scimpulse.org.
  • Bauer R; Biosciences Institute, Newcastle University, Newcastle Upon Tyne, UK; School of Computing, Newcastle University, Newcastle Upon Tyne, UK. Electronic address: roman.bauer@newcastle.ac.uk.
  • Vavourakis V; Department of Mechanical & Manufacturing Engineering, University of Cyprus, Nicosia, Cyprus; Department of Medical Physics & Biomedical Engineering, University College London, London, UK. Electronic address: v.vavourakis@ucl.ac.uk.
Methods ; 185: 94-104, 2021 01.
Article in En | MEDLINE | ID: mdl-31981608
ABSTRACT
This paper develops a three-dimensional in silico hybrid model of cancer, which describes the multi-variate phenotypic behaviour of tumour and host cells. The model encompasses the role of cell migration and adhesion, the influence of the extracellular matrix, the effects of oxygen and nutrient availability, and the signalling triggered by chemical cues and growth factors. The proposed in silico hybrid modelling framework combines successfully the advantages of continuum-based and discrete methods, namely the finite element and agent-based method respectively. The framework is thus used to realistically model cancer mechano-biology in a multiscale fashion while maintaining the resolution power of each method in a computationally cost-effective manner. The model is tailored to simulate glioma progression, and is subsequently used to interrogate the balance between the host cells and small sized gliomas, while the go-or-grow phenotype characteristic in glioblastomas is also investigated. Also, cell-cell and cell-matrix interactions are examined with respect to their effect in (macroscopic) tumour growth, brain tissue perfusion and tumour necrosis. Finally, we use the in silico framework to assess differences between low-grade and high-grade glioma growth, demonstrating significant differences in the distribution of cancer as well as host cells, in accordance with reported experimental findings.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Computer Simulation / Glioma / Models, Biological / Neovascularization, Pathologic Type of study: Prognostic_studies Limits: Humans Language: En Journal: Methods Journal subject: BIOQUIMICA Year: 2021 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Computer Simulation / Glioma / Models, Biological / Neovascularization, Pathologic Type of study: Prognostic_studies Limits: Humans Language: En Journal: Methods Journal subject: BIOQUIMICA Year: 2021 Document type: Article
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