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Proteomic Portraits Reveal Evolutionarily Conserved and Divergent Responses to Spinal Cord Injury.
Skinnider, Michael A; Rogalski, Jason; Tigchelaar, Seth; Manouchehri, Neda; Prudova, Anna; Jackson, Angela M; Nielsen, Karina; Jeong, Jaihyun; Chaudhary, Shalini; Shortt, Katelyn; Gallagher-Kurtzke, Ylonna; So, Kitty; Fong, Allan; Gupta, Rishab; Okon, Elena B; Rizzuto, Michael A; Dong, Kevin; Streijger, Femke; Belanger, Lise; Ritchie, Leanna; Tsang, Angela; Christie, Sean; Mac-Thiong, Jean-Marc; Bailey, Christopher; Ailon, Tamir; Charest-Morin, Raphaele; Dea, Nicolas; Wilson, Jefferson R; Dhall, Sanjay; Paquette, Scott; Street, John; Fisher, Charles G; Dvorak, Marcel F; Shannon, Casey; Borchers, Christoph; Balshaw, Robert; Foster, Leonard J; Kwon, Brian K.
Affiliation
  • Skinnider MA; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada.
  • Rogalski J; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada.
  • Tigchelaar S; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Manouchehri N; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Prudova A; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada.
  • Jackson AM; UVic-Genome BC Proteomics Centre, Victoria, British Columbia, Canada.
  • Nielsen K; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada.
  • Jeong J; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada.
  • Chaudhary S; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada.
  • Shortt K; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Gallagher-Kurtzke Y; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • So K; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Fong A; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Gupta R; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Okon EB; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Rizzuto MA; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Dong K; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Streijger F; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada.
  • Belanger L; Vancouver Spine Program, Vancouver, British Columbia, Canada.
  • Ritchie L; Vancouver Spine Program, Vancouver, British Columbia, Canada.
  • Tsang A; Vancouver Spine Program, Vancouver, British Columbia, Canada.
  • Christie S; Division of Neurosurgery, Dalhousie University, Halifax, Nova Scotia, Canada.
  • Mac-Thiong JM; Department of Surgery, Hôpital du Sacrè-Coeur de Montrèal, Montrèal, Quebec, Canada; Chu Sainte-Justine, Department of Surgery, Universitè de Montrèal, Montrèal, Quebec, Canada.
  • Bailey C; Division of Orthopaedic Surgery, London Health Sciences Centre, University of Western Ontario, London, Ontario, Canada.
  • Ailon T; Division of Neurosurgery, University of British Columbia, Vancouver, British Columbia, Canada.
  • Charest-Morin R; Department of Orthopaedics, Division of Spine, University of British Columbia, Vancouver, British Columbia, Canada.
  • Dea N; Division of Neurosurgery, University of British Columbia, Vancouver, British Columbia, Canada.
  • Wilson JR; Division of Neurosurgery, University of Toronto, St Michael's Hospital, Toronto, Ontario, Canada.
  • Dhall S; Department of Neurosurgery, University of California San Francisco, San Francisco, California, USA.
  • Paquette S; Division of Neurosurgery, University of British Columbia, Vancouver, British Columbia, Canada.
  • Street J; Department of Orthopaedics, Division of Spine, University of British Columbia, Vancouver, British Columbia, Canada.
  • Fisher CG; Department of Orthopaedics, Division of Spine, University of British Columbia, Vancouver, British Columbia, Canada.
  • Dvorak MF; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada; Department of Orthopaedics, Division of Spine, University of British Columbia, Vancouver, British Columbia, Canada.
  • Shannon C; Prevention of Organ Failure (PROOF) Centre of Excellence, Vancouver, British Columbia, Canada.
  • Borchers C; UVic-Genome BC Proteomics Centre, Victoria, British Columbia, Canada.
  • Balshaw R; Prevention of Organ Failure (PROOF) Centre of Excellence, Vancouver, British Columbia, Canada.
  • Foster LJ; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada; Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada. Electronic address: foster@msl.ubc.ca.
  • Kwon BK; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada; Department of Orthopaedics, Division of Spine, University of British Columbia, Vancouver, British Columbia, Canada. Electronic address: brian.kwon@ubc.ca.
Mol Cell Proteomics ; 20: 100096, 2021.
Article in En | MEDLINE | ID: mdl-34129941
ABSTRACT
Despite the emergence of promising therapeutic approaches in preclinical studies, the failure of large-scale clinical trials leaves clinicians without effective treatments for acute spinal cord injury (SCI). These trials are hindered by their reliance on detailed neurological examinations to establish outcomes, which inflate the time and resources required for completion. Moreover, therapeutic development takes place in animal models whose relevance to human injury remains unclear. Here, we address these challenges through targeted proteomic analyses of cerebrospinal fluid and serum samples from 111 patients with acute SCI and, in parallel, a large animal (porcine) model of SCI. We develop protein biomarkers of injury severity and recovery, including a prognostic model of neurological improvement at 6 months with an area under the receiver operating characteristic curve of 0.91, and validate these in an independent cohort. Through cross-species proteomic analyses, we dissect evolutionarily conserved and divergent aspects of the SCI response and establish the cerebrospinal fluid abundance of glial fibrillary acidic protein as a biochemical outcome measure in both humans and pigs. Our work opens up new avenues to catalyze translation by facilitating the evaluation of novel SCI therapies, while also providing a resource from which to direct future preclinical efforts.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Spinal Cord Injuries / Glial Fibrillary Acidic Protein Type of study: Clinical_trials / Observational_studies / Prognostic_studies Limits: Animals / Female / Humans Language: En Journal: Mol Cell Proteomics Journal subject: BIOLOGIA MOLECULAR / BIOQUIMICA Year: 2021 Document type: Article Affiliation country:

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Spinal Cord Injuries / Glial Fibrillary Acidic Protein Type of study: Clinical_trials / Observational_studies / Prognostic_studies Limits: Animals / Female / Humans Language: En Journal: Mol Cell Proteomics Journal subject: BIOLOGIA MOLECULAR / BIOQUIMICA Year: 2021 Document type: Article Affiliation country: