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Can auxiliary indicators improve COVID-19 forecasting and hotspot prediction?
McDonald, Daniel J; Bien, Jacob; Green, Alden; Hu, Addison J; DeFries, Nat; Hyun, Sangwon; Oliveira, Natalia L; Sharpnack, James; Tang, Jingjing; Tibshirani, Robert; Ventura, Valérie; Wasserman, Larry; Tibshirani, Ryan J.
Affiliation
  • McDonald DJ; Department of Statistics, University of British Columbia, Vancouver, BC, Canada V6T 1Z4; daniel@stat.ubc.ca.
  • Bien J; Department of Data Sciences and Operations, University of Southern California, Los Angeles, CA 90089.
  • Green A; Department of Statistics & Data Science, Carnegie Mellon University, Pittsburgh, PA 15213.
  • Hu AJ; Department of Statistics & Data Science, Carnegie Mellon University, Pittsburgh, PA 15213.
  • DeFries N; Machine Learning Department, Carnegie Mellon University, Pittsburgh, PA 15213.
  • Hyun S; Machine Learning Department, Carnegie Mellon University, Pittsburgh, PA 15213.
  • Oliveira NL; Department of Data Sciences and Operations, University of Southern California, Los Angeles, CA 90089.
  • Sharpnack J; Department of Statistics & Data Science, Carnegie Mellon University, Pittsburgh, PA 15213.
  • Tang J; Machine Learning Department, Carnegie Mellon University, Pittsburgh, PA 15213.
  • Tibshirani R; Department of Statistics, University of California, Davis, CA 95616.
  • Ventura V; Computational Biology Department, Carnegie Mellon University, Pittsburgh, PA 15213.
  • Wasserman L; Department of Statistics, Stanford University, Stanford, CA 94305.
  • Tibshirani RJ; Department of Biomedical Data Science, Stanford University, Stanford, CA 94305.
Proc Natl Acad Sci U S A ; 118(51)2021 12 21.
Article in En | MEDLINE | ID: mdl-34903655
ABSTRACT
Short-term forecasts of traditional streams from public health reporting (such as cases, hospitalizations, and deaths) are a key input to public health decision-making during a pandemic. Since early 2020, our research group has worked with data partners to collect, curate, and make publicly available numerous real-time COVID-19 indicators, providing multiple views of pandemic activity in the United States. This paper studies the utility of five such indicators-derived from deidentified medical insurance claims, self-reported symptoms from online surveys, and COVID-related Google search activity-from a forecasting perspective. For each indicator, we ask whether its inclusion in an autoregressive (AR) model leads to improved predictive accuracy relative to the same model excluding it. Such an AR model, without external features, is already competitive with many top COVID-19 forecasting models in use today. Our analysis reveals that 1) inclusion of each of these five indicators improves on the overall predictive accuracy of the AR model; 2) predictive gains are in general most pronounced during times in which COVID cases are trending in "flat" or "down" directions; and 3) one indicator, based on Google searches, seems to be particularly helpful during "up" trends.
Subject(s)
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Health Status Indicators / Models, Statistical / COVID-19 Type of study: Etiology_studies / Prognostic_studies / Risk_factors_studies Aspects: Determinantes_sociais_saude / Patient_preference Limits: Humans Country/Region as subject: America do norte Language: En Journal: Proc Natl Acad Sci U S A Year: 2021 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Health Status Indicators / Models, Statistical / COVID-19 Type of study: Etiology_studies / Prognostic_studies / Risk_factors_studies Aspects: Determinantes_sociais_saude / Patient_preference Limits: Humans Country/Region as subject: America do norte Language: En Journal: Proc Natl Acad Sci U S A Year: 2021 Document type: Article