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Novel nested patch-based feature extraction model for automated Parkinson's Disease symptom classification using MRI images.
Kaplan, Ela; Altunisik, Erman; Ekmekyapar Firat, Yasemin; Datta Barua, Prabal; Dogan, Sengul; Baygin, Mehmet; Burak Demir, Fahrettin; Tuncer, Turker; Palmer, Elizabeth; Tan, Ru-San; Yu, Ping; Soar, Jeffrey; Fujita, Hamido; Rajendra Acharya, U.
Affiliation
  • Kaplan E; Department of Radiology, Adiyaman Training and Research Hospital, Turkey.
  • Altunisik E; Department of Neurology, Adiyaman University Medicine Faculty, Adiyaman, Turkey.
  • Ekmekyapar Firat Y; Department of Neurology, SANKO University Medicine Faculty, Gaziantep, Turkey.
  • Datta Barua P; School of Business (Information Systems), University of Southern Queensland, Toowoomba, QLD 4350, Australia; Faculty of Engineering and Information Technology, University of Technology Sydney, Sydney, NSW 2007, Australia.
  • Dogan S; Department of Digital Forensics Engineering, College of Technology, Firat University, Elazig, Turkey.
  • Baygin M; Department of Computer Engineering, College of Engineering, Ardahan University, Ardahan, Turkey.
  • Burak Demir F; Department of Software Engineering, Faculty of Engineering and Natural Sciences, Bandirma Onyedi Eylul University, Bandirma, Turkey.
  • Tuncer T; Department of Digital Forensics Engineering, College of Technology, Firat University, Elazig, Turkey.
  • Palmer E; Centre of Clinical Genetics, Sydney Children's Hospitals Network, Randwick 2031, Australia; Discipline of Paediatrics and Child Health, School of Clinical Medicine Randwick, Faculty of Medicine and Health, UNSW, Randwick, NSW 2031, Australia.
  • Tan RS; Department of Cardiology, National Heart Centre Singapore, Singapore; Duke-NUS Medical School, Singapore.
  • Yu P; School of Computing and Information Technology, University of Wollongong, Wollongong NSW 2522, Australia.
  • Soar J; School of Business (Information Systems), University of Southern Queensland, Toowoomba, QLD 4350, Australia.
  • Fujita H; Faculty of Information Technology, HUTECH University of Technology, Ho Chi Minh City, Viet Nam; Andalusian Research Institute in Data Science and Computational Intelligence, University of Granada, Granada, Spain; Regional Research Center, Iwate Prefectural University, Iwate, Japan.
  • Rajendra Acharya U; School of Business (Information Systems), University of Southern Queensland, Toowoomba, QLD 4350, Australia; Ngee Ann Polytechnic, Department of Electronics and Computer Engineering, 599489, Singapore; Department of Biomedical Engineering, School of Science and Technology, SUSS University, Singapore
Comput Methods Programs Biomed ; 224: 107030, 2022 Sep.
Article in En | MEDLINE | ID: mdl-35878484
ABSTRACT

OBJECTIVE:

Parkinson's disease (PD) is a common neurological disorder with variable clinical manifestations and magnetic resonance imaging (MRI) findings. We propose a handcrafted image classification model that can accurately (i) classify different PD stages, (ii) detect comorbid dementia, and (iii) discriminate PD-related motor symptoms.

METHODS:

Selected image datasets from three PD studies were used to develop the classification model. Our proposed novel automated system was developed in four phases (i) texture features are extracted from the non-fixed size patches. In the feature extraction phase, a pyramid histogram-oriented gradient (PHOG) image descriptor is used. (ii) In the feature selection phase, four feature selectors neighborhood component analysis (NCA), Chi2, minimum redundancy maximum relevancy (mRMR), and ReliefF are used to generate four feature vectors. (iii) Two classifiers k-nearest neighbor (kNN) and support vector machine (SVM) are used in the classification step. A ten-fold cross-validation technique is used to validate the results. (iv) Eight predicted vectors are generated using four selected feature vectors and two classifiers. Finally, iterative majority voting (IMV) is used to attain general classification results. Therefore, this model is named nested patch-PHOG-multiple feature selectors and multiple classifiers-IMV (NP-PHOG-MFSMCIMV).

RESULTS:

Our presented NP-PHOG-MFSMCIMV model achieved 99.22, 98.70, and 99.53% accuracies for the collected PD stages, PD dementia, and PD symptoms classification datasets, respectively.

SIGNIFICANCE:

The obtained accuracies (over 98% for all states) demonstrated the performance of developed NP-PHOG-MFSMCIMV model in automated PD state classification.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Parkinson Disease / Alzheimer Disease Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: Comput Methods Programs Biomed Journal subject: INFORMATICA MEDICA Year: 2022 Document type: Article Affiliation country:

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Parkinson Disease / Alzheimer Disease Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: Comput Methods Programs Biomed Journal subject: INFORMATICA MEDICA Year: 2022 Document type: Article Affiliation country:
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