PDBImages: a command-line tool for automated macromolecular structure visualization.
Bioinformatics
; 39(12)2023 12 01.
Article
in En
| MEDLINE
| ID: mdl-38085238
ABSTRACT
SUMMARY:
PDBImages is an innovative, open-source Node.js package that harnesses the power of the popular macromolecule structure visualization software Mol*. Designed for use by the scientific community, PDBImages provides a means to generate high-quality images for PDB and AlphaFold DB models. Its unique ability to render and save images directly to files in a browserless mode sets it apart, offering users a streamlined, automated process for macromolecular structure visualization. Here, we detail the implementation of PDBImages, enumerating its diverse image types, and elaborating on its user-friendly setup. This powerful tool opens a new gateway for researchers to visualize, analyse, and share their work, fostering a deeper understanding of bioinformatics. AVAILABILITY AND IMPLEMENTATION PDBImages is available as an npm package from https//www.npmjs.com/package/pdb-images. The source code is available from https//github.com/PDBeurope/pdb-images.
Full text:
1
Collection:
01-internacional
Database:
MEDLINE
Main subject:
Software
/
Computational Biology
Language:
En
Journal:
Bioinformatics
Journal subject:
INFORMATICA MEDICA
Year:
2023
Document type:
Article
Affiliation country: