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Multi-species Ontologies of the Craniofacial Musculoskeletal System.
Mejino, Jose L V; Detwiler, Landon T; Cox, Timothy C; Brinkley, James F.
Affiliation
  • Mejino JL; Department of Biological Structure, University of Washington.
  • Detwiler LT; Department of Biological Structure, University of Washington.
  • Cox TC; Division of Craniofacial Medicine, Department of Pediatrics, University of Washington; Center for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, USA.
  • Brinkley JF; Department of Biological Structure, University of Washington; Department of Biomedical Informatics and Medical Education, University of Washington.
CEUR Workshop Proc ; 17472016 Aug.
Article in En | MEDLINE | ID: mdl-28217040
We created the Ontology of Craniofacial Development and Malformation (OCDM) [1] to provide a unifying framework for organizing and integrating craniofacial data ranging from genes to clinical phenotypes from multi-species. Within this framework we focused on spatio-structural representation of anatomical entities related to craniofacial development and malformation, such as craniosynostosis and midface hypoplasia. Animal models are used to support human studies and so we built multi-species ontologies that would allow for cross-species correlation of anatomical information. For this purpose we first developed and enhanced the craniofacial component of the human musculoskeletal system in the Foundational Model of Anatomy Ontology (FMA)[2], and then imported this component, which we call the Craniofacial Human Ontology (CHO), into the OCDM. The CHO was then used as a template to create the anatomy for the mouse, the Craniofacial Mouse Ontology (CMO) as well as for the zebrafish, the Craniofacial Zebrafish Ontology (CZO).
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Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: CEUR Workshop Proc Year: 2016 Document type: Article Country of publication: Alemania

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: CEUR Workshop Proc Year: 2016 Document type: Article Country of publication: Alemania