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A high-throughput pipeline for validation of antibodies.
Sikorski, Krzysztof; Mehta, Adi; Inngjerdingen, Marit; Thakor, Flourina; Kling, Simon; Kalina, Tomas; Nyman, Tuula A; Stensland, Maria Ekman; Zhou, Wei; de Souza, Gustavo A; Holden, Lars; Stuchly, Jan; Templin, Markus; Lund-Johansen, Fridtjof.
Affiliation
  • Sikorski K; Department of Immunology, University of Oslo and Oslo University Hospital, Oslo, Norway.
  • Mehta A; K.G. Jebsen Center for Cancer Immunotherapy, University of Oslo, Oslo, Norway.
  • Inngjerdingen M; Department of Immunology, University of Oslo and Oslo University Hospital, Oslo, Norway.
  • Thakor F; Department of Pathology, Oslo University Hospital, Oslo, Norway.
  • Kling S; K.G. Jebsen Inflammation Research Centre, University of Oslo, Oslo, Norway.
  • Kalina T; Department of Immunology, University of Oslo and Oslo University Hospital, Oslo, Norway.
  • Nyman TA; Department of Pathology, Oslo University Hospital, Oslo, Norway.
  • Stensland ME; K.G. Jebsen Inflammation Research Centre, University of Oslo, Oslo, Norway.
  • Zhou W; NMI Natural and Medical Sciences Institute, University of Tübingen, Reutlingen, Germany.
  • de Souza GA; CLIP-Childhood Leukemia Investigation Prague, Department of Pediatric Hematology and Oncology, 2nd Faculty of Medicine, Charles University Prague and University Hospital Motol, Prague, Czech Republic.
  • Holden L; Department of Immunology, University of Oslo and Oslo University Hospital, Oslo, Norway.
  • Stuchly J; Department of Immunology, University of Oslo and Oslo University Hospital, Oslo, Norway.
  • Templin M; SeekQuence, Mountain View, CA, USA.
  • Lund-Johansen F; The Brain Institute, Universidade Federal do Rio Grande do Norte, Natal, Brazil.
Nat Methods ; 15(11): 909-912, 2018 11.
Article in En | MEDLINE | ID: mdl-30377371
ABSTRACT
Western blotting (WB) is widely used to test antibody specificity, but the assay has low throughput and precision. Here we used preparative gel electrophoresis to develop a capture format for WB. Fractions with soluble, size-separated proteins facilitated parallel readout with antibody arrays, shotgun mass spectrometry (MS) and immunoprecipitation followed by MS (IP-MS). This pipeline provided the means for large-scale implementation of antibody validation concepts proposed by an international working group on antibody validation (IWGAV).
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Proteomics / High-Throughput Screening Assays / Antibodies / Neoplasm Proteins / Neoplasms Limits: Humans Language: En Journal: Nat Methods Journal subject: TECNICAS E PROCEDIMENTOS DE LABORATORIO Year: 2018 Document type: Article Affiliation country: Noruega

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Proteomics / High-Throughput Screening Assays / Antibodies / Neoplasm Proteins / Neoplasms Limits: Humans Language: En Journal: Nat Methods Journal subject: TECNICAS E PROCEDIMENTOS DE LABORATORIO Year: 2018 Document type: Article Affiliation country: Noruega