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Radiomics and MGMT promoter methylation for prognostication of newly diagnosed glioblastoma.
Sasaki, Takahiro; Kinoshita, Manabu; Fujita, Koji; Fukai, Junya; Hayashi, Nobuhide; Uematsu, Yuji; Okita, Yoshiko; Nonaka, Masahiro; Moriuchi, Shusuke; Uda, Takehiro; Tsuyuguchi, Naohiro; Arita, Hideyuki; Mori, Kanji; Ishibashi, Kenichi; Takano, Koji; Nishida, Namiko; Shofuda, Tomoko; Yoshioka, Ema; Kanematsu, Daisuke; Kodama, Yoshinori; Mano, Masayuki; Nakao, Naoyuki; Kanemura, Yonehiro.
Affiliation
  • Sasaki T; Department of Neurosurgery, Wakayama Rosai Hospital, Wakayama, 640-8505, Japan.
  • Kinoshita M; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan.
  • Fujita K; Department of Neurological Surgery, Wakayama Medical University School of Medicine, Wakayama, 641-0012, Japan.
  • Fukai J; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan. mail@manabukinoshita.com.
  • Hayashi N; Department of Neurosurgery, Osaka International Cancer Institute, Osaka, 541-8567, Japan. mail@manabukinoshita.com.
  • Uematsu Y; Department of Neurosurgery, Osaka University Graduate School of Medicine, Suita, 565-0871, Japan. mail@manabukinoshita.com.
  • Okita Y; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan.
  • Nonaka M; Department of Neurological Surgery, Wakayama Medical University School of Medicine, Wakayama, 641-0012, Japan.
  • Moriuchi S; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan.
  • Uda T; Department of Neurological Surgery, Wakayama Medical University School of Medicine, Wakayama, 641-0012, Japan.
  • Tsuyuguchi N; Department of Neurosurgery, Wakayama Rosai Hospital, Wakayama, 640-8505, Japan.
  • Arita H; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan.
  • Mori K; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan.
  • Ishibashi K; Department of Neurological Surgery, Wakayama Medical University School of Medicine, Wakayama, 641-0012, Japan.
  • Takano K; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan.
  • Nishida N; Department of Neurosurgery, National Hospital Organization Osaka National Hospital, Osaka, 540-0006, Japan.
  • Shofuda T; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan.
  • Yoshioka E; Department of Neurosurgery, National Hospital Organization Osaka National Hospital, Osaka, 540-0006, Japan.
  • Kanematsu D; Department of Neurosurgery, Kansai Medical University, Hirakata, 573-1191, Japan.
  • Kodama Y; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan.
  • Mano M; Department of Neurosurgery, National Hospital Organization Osaka National Hospital, Osaka, 540-0006, Japan.
  • Nakao N; Moriuchi Clinic of Neurosurgery, Izumiotsu, Osaka, 595-0024, Japan.
  • Kanemura Y; Kansai Molecular Diagnosis Network for CNS Tumors, Osaka, 540-0006, Japan.
Sci Rep ; 9(1): 14435, 2019 10 08.
Article in En | MEDLINE | ID: mdl-31594994
ABSTRACT
We attempted to establish a magnetic resonance imaging (MRI)-based radiomic model for stratifying prognostic subgroups of newly diagnosed glioblastoma (GBM) patients and predicting O (6)-methylguanine-DNA methyltransferase promotor methylation (pMGMT-met) status of the tumor. Preoperative MRI scans from 201 newly diagnosed GBM patients were included in this study. A total of 489 texture features including the first-order feature, second-order features from 162 datasets, and location data from 182 datasets were collected. Supervised principal component analysis was used for prognostication and predictive modeling for pMGMT-met status was performed based on least absolute shrinkage and selection operator regression. 22 radiomic features that were correlated with prognosis were used to successfully stratify patients into high-risk and low-risk groups (p = 0.004, Log-rank test). The radiomic high- and low-risk stratification and pMGMT status were independent prognostic factors. As a matter of fact, predictive accuracy of the pMGMT methylation status was 67% when modeled by two significant radiomic features. A significant survival difference was observed among the combined high-risk group, combined intermediate-risk group (this group consists of radiomic low risk and pMGMT-unmet or radiomic high risk and pMGMT-met), and combined low-risk group (p = 0.0003, Log-rank test). Radiomics can be used to build a prognostic score for stratifying high- and low-risk GBM, which was an independent prognostic factor from pMGMT methylation status. On the other hand, predictive accuracy of the pMGMT methylation status by radiomic analysis was insufficient for practical use.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Brain Neoplasms / DNA Modification Methylases / Promoter Regions, Genetic / Glioblastoma / DNA Methylation / Tumor Suppressor Proteins / DNA Repair Enzymes Type of study: Diagnostic_studies / Etiology_studies / Incidence_studies / Observational_studies / Prognostic_studies / Risk_factors_studies Limits: Humans Language: En Journal: Sci Rep Year: 2019 Document type: Article Affiliation country: Japón

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Brain Neoplasms / DNA Modification Methylases / Promoter Regions, Genetic / Glioblastoma / DNA Methylation / Tumor Suppressor Proteins / DNA Repair Enzymes Type of study: Diagnostic_studies / Etiology_studies / Incidence_studies / Observational_studies / Prognostic_studies / Risk_factors_studies Limits: Humans Language: En Journal: Sci Rep Year: 2019 Document type: Article Affiliation country: Japón
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