RSAT variation-tools: An accessible and flexible framework to predict the impact of regulatory variants on transcription factor binding.
Comput Struct Biotechnol J
; 17: 1415-1428, 2019.
Article
in En
| MEDLINE
| ID: mdl-31871587
Binding motifs; CEU, Northern Europeans from Utah; CRM, Cis-Regulatory Module; GWAS, Genome Wide Association Studies; LD, Linkage Disequilibrium; MPRA, Massively Parallel Reporter Assays: MPRA; PSSM, Position Specific Scoring Matrix; Position specific scoring matrix; ROC, Receiver Operating Characteristic; RSAT, Regulatory Sequence Analysis Tools; Regulatory variants; SNP, Single Nucleotide Polymorphism; SNPs; SOIs, SNPs of Interest; TF, Transcription Factor; TFBS, Transcription Factor Binding Site; Transcription factors; eQTL, Expression Quantitative Trait Loci; rsID, Reference SNP Identifier
Full text:
1
Collection:
01-internacional
Database:
MEDLINE
Type of study:
Prognostic_studies
/
Risk_factors_studies
Language:
En
Journal:
Comput Struct Biotechnol J
Year:
2019
Document type:
Article
Affiliation country:
Francia
Country of publication:
Países Bajos