Genome-wide MNase hypersensitivity assay unveils distinct classes of open chromatin associated with H3K27me3 and DNA methylation in Arabidopsis thaliana.

Zhao, Hainan; Zhang, Wenli; Zhang, Tao; Lin, Yuan; Hu, Yaodong; Fang, Chao; Jiang, Jiming

Zhao, Hainan; Zhang, Wenli; Zhang, Tao; Lin, Yuan; Hu, Yaodong; Fang, Chao; Jiang, Jiming.

Affiliation

Zhao H; Department of Plant Biology, Michigan State University, East Lansing, MI, 48824, USA.
Zhang W; Department of Horticulture, Michigan State University, East Lansing, MI, 48824, USA.
Zhang T; Department of Horticulture, University of Wisconsin-Madison, Madison, WI, 53706, USA. wzhang25@njau.edu.cn.
Lin Y; State Key Laboratory for Crop Genetics and Germplasm Enhancement, Nanjing Agriculture University, Nanjing, 210095, Jiangsu, China. wzhang25@njau.edu.cn.
Hu Y; Department of Horticulture, University of Wisconsin-Madison, Madison, WI, 53706, USA.
Fang C; Key Laboratory of Crop Genetics and Physiology of Jiangsu Province/Key Laboratory of Plant Functional Genomics of Ministry of Education, Yangzhou University, Yangzhou, 225009, China.
Jiang J; Department of Plant Biology, Michigan State University, East Lansing, MI, 48824, USA.

Genome Biol ; 21(1): 24, 2020 02 03.

Article in En | MEDLINE | ID: mdl-32014062

Subject(s)
Key words

ATAC-seq; Arabidopsis thaliana; DNA methylation; DNase-seq; Histone modification; Open chromatin; cis-regulatory elements

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Chromatin / Sequence Analysis, DNA / DNA Methylation / Histone Code Type of study: Prognostic_studies / Risk_factors_studies Language: En Journal: Genome Biol Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2020 Document type: Article Affiliation country: Estados Unidos Country of publication: Reino Unido

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