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instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder.
Baudry, Lyam; Guiglielmoni, Nadège; Marie-Nelly, Hervé; Cormier, Alexandre; Marbouty, Martial; Avia, Komlan; Mie, Yann Loe; Godfroy, Olivier; Sterck, Lieven; Cock, J Mark; Zimmer, Christophe; Coelho, Susana M; Koszul, Romain.
Affiliation
  • Baudry L; Institut Pasteur, Unité Régulation Spatiale des Génomes, CNRS, UMR 3525, C3BI USR 3756, F-75015, Paris, France.
  • Guiglielmoni N; Sorbonne Université, Collège Doctoral, F-75005, Paris, France.
  • Marie-Nelly H; Institut Pasteur, Unité Régulation Spatiale des Génomes, CNRS, UMR 3525, C3BI USR 3756, F-75015, Paris, France.
  • Cormier A; Evolutionary Biology & Ecology, Université Libre de Bruxelles, 1050, Brussels, Belgium.
  • Marbouty M; Institut Pasteur, Unité Régulation Spatiale des Génomes, CNRS, UMR 3525, C3BI USR 3756, F-75015, Paris, France.
  • Avia K; Sorbonne Université, Collège Doctoral, F-75005, Paris, France.
  • Mie YL; Sorbonne Université, Laboratory of Integrative Biology of Marine Models, Algal Genetics, UMR 8227, Roscoff, France.
  • Godfroy O; Institut Pasteur, Unité Régulation Spatiale des Génomes, CNRS, UMR 3525, C3BI USR 3756, F-75015, Paris, France.
  • Sterck L; Sorbonne Université, Laboratory of Integrative Biology of Marine Models, Algal Genetics, UMR 8227, Roscoff, France.
  • Cock JM; Present Address: Université de Strasbourg, INRA, SVQV UMR-A 1131, Colmar, France.
  • Zimmer C; Institut Pasteur, Center of Bioinformatics, Biostatistics and Integrative Biology (C3BI), USR3756, CNRS, Paris, France.
  • Coelho SM; Sorbonne Université, Laboratory of Integrative Biology of Marine Models, Algal Genetics, UMR 8227, Roscoff, France.
  • Koszul R; Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Ghent, Belgium.
Genome Biol ; 21(1): 148, 2020 06 18.
Article in En | MEDLINE | ID: mdl-32552806
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Seaweed / Software / Chromosomes / Genomics Limits: Humans Language: En Journal: Genome Biol Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2020 Document type: Article Affiliation country: Francia
Fulltext
Add to My VHL
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Seaweed / Software / Chromosomes / Genomics Limits: Humans Language: En Journal: Genome Biol Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2020 Document type: Article Affiliation country: Francia