Siberian sturgeon multi-tissue reference transcriptome database.
Database (Oxford)
; 20202020 11 25.
Article
in En
| MEDLINE
| ID: mdl-33238003
ABSTRACT
MOTIVATION Siberian sturgeon is a long lived and late maturing fish farmed for caviar production in 50 countries. Functional genomics enable to find genes of interest for fish farming. In the absence of a reference genome, a reference transcriptome is very useful for sequencing based functional studies. RESULTS:
We present here a high-quality transcriptome assembly database built using RNA-seq reads coming from brain, pituitary, gonadal, liver, stomach, kidney, anterior kidney, heart, embryonic and pre-larval tissues. It will facilitate crucial research on topics such as puberty, reproduction, growth, food intake and immunology. This database represents a major contribution to the publicly available sturgeon transcriptome reference datasets.AVAILABILITY:
The database is publicly available at http//siberiansturgeontissuedb.sigenae.org Supplementary information Supplementary data are available at Database online.
Full text:
1
Collection:
01-internacional
Database:
MEDLINE
Main subject:
Transcriptome
/
Fishes
Limits:
Animals
Language:
En
Journal:
Database (Oxford)
Year:
2020
Document type:
Article
Affiliation country:
Francia
Publication country:
ENGLAND
/
ESCOCIA
/
GB
/
GREAT BRITAIN
/
INGLATERRA
/
REINO UNIDO
/
SCOTLAND
/
UK
/
UNITED KINGDOM