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Identifying species-specific k-mers for fast and accurate metagenotyping with Maast and GT-Pro.
Shi, Zhou Jason; Nayfach, Stephen; Pollard, Katherine S.
Affiliation
  • Shi ZJ; Chan Zuckerberg Biohub, San Francisco, CA, USA; Gladstone Institutes, Data Science and Biotechnology, San Francisco, CA, USA.
  • Nayfach S; Department of Energy, Joint Genome Institute, Walnut Creek, CA, USA; Lawrence Berkeley National Laboratory, Environmental Genomics and Systems Biology Division, Berkeley, CA, USA.
  • Pollard KS; Chan Zuckerberg Biohub, San Francisco, CA, USA; Gladstone Institutes, Data Science and Biotechnology, San Francisco, CA, USA; University of California San Francisco, Department of Epidemiology and Biostatistics, San Francisco, CA, USA. Electronic address: katherine.pollard@gladstone.ucsf.edu.
STAR Protoc ; 4(1): 101964, 2023 03 17.
Article in En | MEDLINE | ID: mdl-36856771
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome / Microbiota Language: En Journal: STAR Protoc Year: 2023 Document type: Article Affiliation country: Estados Unidos
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome / Microbiota Language: En Journal: STAR Protoc Year: 2023 Document type: Article Affiliation country: Estados Unidos