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Accurate transcriptome-wide identification and quantification of alternative polyadenylation from RNA-seq data with APAIQ.
Long, Yongkang; Zhang, Bin; Tian, Shuye; Chan, Jia Jia; Zhou, Juexiao; Li, Zhongxiao; Li, Yisheng; An, Zheng; Liao, Xingyu; Wang, Yu; Sun, Shiwei; Xu, Ying; Tay, Yvonne; Chen, Wei; Gao, Xin.
Affiliation
  • Long Y; Computer Science Program, Computer, Electrical and Mathematical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955 Saudi Arabia.
  • Zhang B; Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, 23955 Saudi Arabia.
  • Tian S; Computer Science Program, Computer, Electrical and Mathematical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955 Saudi Arabia; xin.gao@kaust.edu.sa chenw@sustech.edu.cn zb.picb@gmail.com.
  • Chan JJ; Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, 23955 Saudi Arabia.
  • Zhou J; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, Department of Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, 518055 China.
  • Li Z; Cancer Science Institute of Singapore, National University of Singapore, 117599 Singapore.
  • Li Y; Computer Science Program, Computer, Electrical and Mathematical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955 Saudi Arabia.
  • An Z; Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, 23955 Saudi Arabia.
  • Liao X; Computer Science Program, Computer, Electrical and Mathematical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955 Saudi Arabia.
  • Wang Y; Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, 23955 Saudi Arabia.
  • Sun S; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, Department of Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, 518055 China.
  • Xu Y; Shenzhen Haoshi Biotechnology Company, Limited, Bao An District, Shenzhen, 518000 China.
  • Tay Y; Computational Systems Biology Lab, Department of Biochemistry and Molecular Biology and Institute of Bioinformatics, the University of Georgia, Athens, Georgia 30605, USA.
  • Chen W; Computer Science Program, Computer, Electrical and Mathematical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955 Saudi Arabia.
  • Gao X; Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, 23955 Saudi Arabia.
Genome Res ; 33(4): 644-657, 2023 04.
Article in En | MEDLINE | ID: mdl-37117035
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Transcriptome / Neoplasms Type of study: Diagnostic_studies Limits: Humans Language: En Journal: Genome Res Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2023 Document type: Article
Fulltext
Add to My VHL
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Transcriptome / Neoplasms Type of study: Diagnostic_studies Limits: Humans Language: En Journal: Genome Res Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2023 Document type: Article