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A graph-based genome and pan-genome variation of the model plant Setaria.
He, Qiang; Tang, Sha; Zhi, Hui; Chen, Jinfeng; Zhang, Jun; Liang, Hongkai; Alam, Ornob; Li, Hongbo; Zhang, Hui; Xing, Lihe; Li, Xukai; Zhang, Wei; Wang, Hailong; Shi, Junpeng; Du, Huilong; Wu, Hongpo; Wang, Liwei; Yang, Ping; Xing, Lu; Yan, Hongshan; Song, Zhongqiang; Liu, Jinrong; Wang, Haigang; Tian, Xiang; Qiao, Zhijun; Feng, Guojun; Guo, Ruifeng; Zhu, Wenjuan; Ren, Yuemei; Hao, Hongbo; Li, Mingzhe; Zhang, Aiying; Guo, Erhu; Yan, Feng; Li, Qingquan; Liu, Yanli; Tian, Bohong; Zhao, Xiaoqin; Jia, Ruiling; Feng, Baili; Zhang, Jiewei; Wei, Jianhua; Lai, Jinsheng; Jia, Guanqing; Purugganan, Michael; Diao, Xianmin.
Affiliation
  • He Q; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Tang S; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Zhi H; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Chen J; State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.
  • Zhang J; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Liang H; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Alam O; Center for Genomics and Systems Biology, New York University, New York City, NY, USA.
  • Li H; Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China.
  • Zhang H; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Xing L; College of Agronomy, Northwest A & F University, Yangling, China.
  • Li X; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Zhang W; College of Life Sciences, Shanxi Agricultural University, Taigu, China.
  • Wang H; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Shi J; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Du H; State Key Laboratory of Plant Physiology and Biochemistry & National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.
  • Wu H; School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding, China.
  • Wang L; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Yang P; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Xing L; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Yan H; Anyang Academy of Agriculture Sciences, Anyang, China.
  • Song Z; Anyang Academy of Agriculture Sciences, Anyang, China.
  • Liu J; Anyang Academy of Agriculture Sciences, Anyang, China.
  • Wang H; Anyang Academy of Agriculture Sciences, Anyang, China.
  • Tian X; Center for Agricultural Genetic Resources Research, Shanxi Agricultural University, Taiyuan, China.
  • Qiao Z; Center for Agricultural Genetic Resources Research, Shanxi Agricultural University, Taiyuan, China.
  • Feng G; Center for Agricultural Genetic Resources Research, Shanxi Agricultural University, Taiyuan, China.
  • Guo R; Research Institute of Cereal Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
  • Zhu W; Institute of High Latitude Crops, Shanxi Agricultural University, Datong, China.
  • Ren Y; Institute of High Latitude Crops, Shanxi Agricultural University, Datong, China.
  • Hao H; Institute of High Latitude Crops, Shanxi Agricultural University, Datong, China.
  • Li M; Institute of Dry-Land Farming, Hebei Academy of Agricultural and Forestry Sciences, Hengshui, China.
  • Zhang A; Institute of Dry-Land Farming, Hebei Academy of Agricultural and Forestry Sciences, Hengshui, China.
  • Guo E; Millet Research Institute, Shanxi Agricultural University, Changzhi, China.
  • Yan F; Millet Research Institute, Shanxi Agricultural University, Changzhi, China.
  • Li Q; Qiqihar Sub-Academy of Heilongjiang Academy of Agricultural Sciences, Qiqihar, China.
  • Liu Y; Qiqihar Sub-Academy of Heilongjiang Academy of Agricultural Sciences, Qiqihar, China.
  • Tian B; Cangzhou Academy of Agriculture and Forestry Sciences, Cangzhou, China.
  • Zhao X; Cangzhou Academy of Agriculture and Forestry Sciences, Cangzhou, China.
  • Jia R; Dingxi Academy of Agricultural Sciences, Dingxi, China.
  • Feng B; Dingxi Academy of Agricultural Sciences, Dingxi, China.
  • Zhang J; College of Agronomy, Northwest A & F University, Yangling, China.
  • Wei J; Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
  • Lai J; Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
  • Jia G; State Key Laboratory of Plant Physiology and Biochemistry & National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.
  • Purugganan M; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China. jiaguanqing@caas.cn.
  • Diao X; Center for Genomics and Systems Biology, New York University, New York City, NY, USA. mp132@nyu.edu.
Nat Genet ; 55(7): 1232-1242, 2023 07.
Article in En | MEDLINE | ID: mdl-37291196
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Setaria Plant Type of study: Prognostic_studies Language: En Journal: Nat Genet Journal subject: GENETICA MEDICA Year: 2023 Document type: Article Affiliation country: China
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Setaria Plant Type of study: Prognostic_studies Language: En Journal: Nat Genet Journal subject: GENETICA MEDICA Year: 2023 Document type: Article Affiliation country: China