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Rapid assessment of changes in phage bioactivity using dynamic light scattering.
Dharmaraj, Tejas; Kratochvil, Michael J; Pourtois, Julie D; Chen, Qingquan; Hajfathalian, Maryam; Hargil, Aviv; Lin, Yung-Hao; Evans, Zoe; Oromí-Bosch, Agnès; Berry, Joel D; McBride, Robert; Haddock, Naomi L; Holman, Derek R; van Belleghem, Jonas D; Chang, Tony H; Barr, Jeremy J; Lavigne, Rob; Heilshorn, Sarah C; Blankenberg, Francis G; Bollyky, Paul L.
Affiliation
  • Dharmaraj T; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
  • Kratochvil MJ; Sarafan ChEM-H, Stanford University, Stanford, CA 94305, USA.
  • Pourtois JD; Department of Materials Science and Engineering, Stanford University, Stanford, CA 94305.
  • Chen Q; Hopkins Marine Station, Department of Biology, Stanford University, Pacific Grove, CA 93950, USA.
  • Hajfathalian M; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
  • Hargil A; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
  • Lin YH; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
  • Evans Z; Department of Chemical Engineering, Stanford University, Stanford, CA 94305, USA.
  • Oromí-Bosch A; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
  • Berry JD; Felix Biotechnology, South San Francisco, CA, 94080.
  • McBride R; Felix Biotechnology, South San Francisco, CA, 94080.
  • Haddock NL; Felix Biotechnology, South San Francisco, CA, 94080.
  • Holman DR; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
  • van Belleghem JD; Division of Gastroenterology and Hepatology, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
  • Chang TH; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
  • Barr JJ; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
  • Lavigne R; School of Biological Sciences, Monash University, Clayton, 3800, VIC, Australia.
  • Heilshorn SC; Department of Biosystems, KU Leuven, Leuven, 3001, Belgium.
  • Blankenberg FG; Department of Materials Science and Engineering, Stanford University, Stanford, CA 94305.
  • Bollyky PL; Division of Pediatric Radiology and Nuclear Medicine, Department of Radiology, Lucile Packard Children's Hospital, Stanford, CA 94305, USA.
bioRxiv ; 2023 Jul 02.
Article in En | MEDLINE | ID: mdl-37425882
ABSTRACT
Extensive efforts are underway to develop bacteriophages as therapies against antibiotic-resistant bacteria. However, these efforts are confounded by the instability of phage preparations and a lack of suitable tools to assess active phage concentrations over time. Here, we use Dynamic Light Scattering (DLS) to measure changes in phage physical state in response to environmental factors and time, finding that phages tend to decay and form aggregates and that the degree of aggregation can be used to predict phage bioactivity. We then use DLS to optimize phage storage conditions for phages from human clinical trials, predict bioactivity in 50-year-old archival stocks, and evaluate phage samples for use in a phage therapy/wound infection model. We also provide a web-application (Phage-ELF) to facilitate DLS studies of phages. We conclude that DLS provides a rapid, convenient, and non-destructive tool for quality control of phage preparations in academic and commercial settings.
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Type of study: Prognostic_studies Language: En Journal: BioRxiv Year: 2023 Document type: Article Affiliation country: Estados Unidos

Full text: 1 Collection: 01-internacional Database: MEDLINE Type of study: Prognostic_studies Language: En Journal: BioRxiv Year: 2023 Document type: Article Affiliation country: Estados Unidos