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Greengenes2 unifies microbial data in a single reference tree.
McDonald, Daniel; Jiang, Yueyu; Balaban, Metin; Cantrell, Kalen; Zhu, Qiyun; Gonzalez, Antonio; Morton, James T; Nicolaou, Giorgia; Parks, Donovan H; Karst, Søren M; Albertsen, Mads; Hugenholtz, Philip; DeSantis, Todd; Song, Se Jin; Bartko, Andrew; Havulinna, Aki S; Jousilahti, Pekka; Cheng, Susan; Inouye, Michael; Niiranen, Teemu; Jain, Mohit; Salomaa, Veikko; Lahti, Leo; Mirarab, Siavash; Knight, Rob.
Affiliation
  • McDonald D; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
  • Jiang Y; Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA, USA.
  • Balaban M; Bioinformatics and Systems Biology Program, University of California San Diego, La Jolla, CA, USA.
  • Cantrell K; Department of Computer Science and Engineering, University of California San Diego, La Jolla, CA, USA.
  • Zhu Q; School of Life Sciences, Arizona State University, Tempe, AZ, USA.
  • Gonzalez A; Biodesign Center for Fundamental and Applied Microbiomics, Arizona State University, Tempe, AZ, USA.
  • Morton JT; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, USA.
  • Nicolaou G; Biostatistics & Bioinformatics Branch, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA.
  • Parks DH; Halicioglu Data Science Institute, University of California San Diego, La Jolla, CA, USA.
  • Karst SM; Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland, Australia.
  • Albertsen M; Department of Obstetrics and Gynecology, Columbia University, New York, NY, USA.
  • Hugenholtz P; Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark.
  • DeSantis T; Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland, Australia.
  • Song SJ; Department of Informatics, Second Genome, Brisbane, CA, USA.
  • Bartko A; Center for Microbiome Innovation, Jacobs School of Engineering, University of California San Diego, La Jolla, CA, USA.
  • Havulinna AS; Center for Microbiome Innovation, Jacobs School of Engineering, University of California San Diego, La Jolla, CA, USA.
  • Jousilahti P; Finnish Institute for Health and Welfare, Helsinki, Finland.
  • Cheng S; Institute for Molecular Medicine Finland, FIMM-HiLIFE, Helsinki, Finland.
  • Inouye M; Finnish Institute for Health and Welfare, Helsinki, Finland.
  • Niiranen T; Division of Cardiology, Brigham and Women's Hospital, Boston, MA, USA.
  • Jain M; Cedars-Sinai Medical Center, Los Angeles, CA, USA.
  • Salomaa V; Cambridge Baker Systems Genomics Initiative, Baker Heart and Diabetes Institute, Melbourne, Victoria, Australia.
  • Lahti L; Cambridge Baker Systems Genomics Initiative, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK.
  • Mirarab S; Finnish Institute for Health and Welfare, Helsinki, Finland.
  • Knight R; Division of Medicine, Turku University Hospital and University of Turku, Turku, Finland.
Nat Biotechnol ; 2023 Jul 27.
Article in En | MEDLINE | ID: mdl-37500913
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Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Nat Biotechnol Journal subject: BIOTECNOLOGIA Year: 2023 Document type: Article Affiliation country: Estados Unidos Country of publication: Estados Unidos
Fulltext
Add to My VHL
Print
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PubMed Links
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Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Nat Biotechnol Journal subject: BIOTECNOLOGIA Year: 2023 Document type: Article Affiliation country: Estados Unidos Country of publication: Estados Unidos