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A Machine Learning-Based Risk Score for Prediction of Infective Endocarditis Among Patients With Staphylococcus aureus Bacteremia-The SABIER Score.
Lai, Christopher Koon-Chi; Leung, Eman; He, Yinan; Ching-Chun, Cheung; Oliver, Mui Oi Yat; Qinze, Yu; Li, Timothy Chun-Man; Lee, Alfred Lok-Hang; Li, Yu; Lui, Grace Chung-Yan.
Affiliation
  • Lai CK; Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China.
  • Leung E; S.H. Ho Research Centre for Infectious Diseases, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China.
  • He Y; School of Public Health and Primary Care, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China.
  • Ching-Chun C; School of Public Health and Primary Care, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China.
  • Oliver MOY; School of Public Health and Primary Care, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China.
  • Qinze Y; Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China.
  • Li TC; Department of Computer Science and Engineering, Faculty of Engineering, The Chinese University of Hong Kong, Hong Kong SAR, China.
  • Lee AL; Department of Medicine and Therapeutics, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China.
  • Li Y; Department of Microbiology, Prince of Wales Hospital, Hospital Authority, Hong Kong, Hong Kong SAR, China.
  • Lui GC; Department of Computer Science and Engineering, Faculty of Engineering, The Chinese University of Hong Kong, Hong Kong SAR, China.
J Infect Dis ; 230(3): 606-613, 2024 Sep 23.
Article in En | MEDLINE | ID: mdl-38420871
ABSTRACT

BACKGROUND:

Early risk assessment is needed to stratify Staphylococcus aureus infective endocarditis (SA-IE) risk among patients with S. aureus bacteremia (SAB) to guide clinical management. The objective of the current study was to develop a novel risk score that is independent of subjective clinical judgment and can be used early, at the time of blood culture positivity.

METHODS:

We conducted a retrospective big data analysis from territory-wide electronic data and included hospitalized patients with SAB between 2009 and 2019. We applied a random forest risk scoring model to select variables from an array of parameters, according to the statistical importance in predicting SA-IE outcome. The data were divided into derivation and validation cohorts. The areas under the curve of the receiver operating characteristic (AUCROCs) were determined.

RESULTS:

We identified 15 741 SAB patients, among them 658 (4.18%) had SA-IE. The AUCROC was 0.74 (95%CI 0.70-0.76), with a negative predictive value of 0.980 (95%CI 0.977-0.983). The four most discriminatory features were age, history of infective endocarditis, valvular heart disease, and community onset.

CONCLUSIONS:

We developed a novel risk score with performance comparable with existing scores, which can be used at the time of SAB and prior to subjective clinical judgment.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Staphylococcal Infections / Staphylococcus aureus / Bacteremia / Endocarditis, Bacterial / Machine Learning Limits: Adult / Aged / Female / Humans / Male / Middle aged Language: En Journal: J Infect Dis Year: 2024 Document type: Article Affiliation country: China Country of publication: Estados Unidos

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Staphylococcal Infections / Staphylococcus aureus / Bacteremia / Endocarditis, Bacterial / Machine Learning Limits: Adult / Aged / Female / Humans / Male / Middle aged Language: En Journal: J Infect Dis Year: 2024 Document type: Article Affiliation country: China Country of publication: Estados Unidos