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NCI Cancer Research Data Commons: Cloud-Based Analytic Resources.
Pot, David; Worman, Zelia; Baumann, Alexander; Pathak, Shirish; Beck, Rowan; Beck, Erin; Thayer, Katherine; Davidsen, Tanja M; Kim, Erika; Davis-Dusenbery, Brandi; Otridge, John; Pihl, Todd; Barnholtz-Sloan, Jill S; Kerlavage, Anthony R.
Affiliation
  • Pot D; General Dynamics Information Technology, Falls Church, Virginia.
  • Worman Z; Velsera (Seven Bridges), Charlestown, Massachusetts.
  • Baumann A; Broad Institute, Cambridge, Massachusetts.
  • Pathak S; Frederick National Laboratory for Cancer Research, Frederick, Maryland.
  • Beck R; Velsera (Seven Bridges), Charlestown, Massachusetts.
  • Beck E; Center for Biomedical Informatics and Information Technology, NCI, Rockville, Maryland.
  • Thayer K; Broad Institute, Cambridge, Massachusetts.
  • Davidsen TM; Center for Biomedical Informatics and Information Technology, NCI, Rockville, Maryland.
  • Kim E; Center for Biomedical Informatics and Information Technology, NCI, Rockville, Maryland.
  • Davis-Dusenbery B; Velsera (Seven Bridges), Charlestown, Massachusetts.
  • Otridge J; Frederick National Laboratory for Cancer Research, Frederick, Maryland.
  • Pihl T; Frederick National Laboratory for Cancer Research, Frederick, Maryland.
  • Barnholtz-Sloan JS; Center for Biomedical Informatics and Information Technology, NCI, Rockville, Maryland.
  • Kerlavage AR; Trans Divisional Research Program, Division of Cancer Epidemiology and Genetics, NCI, Rockville, Maryland.
Cancer Res ; 84(9): 1396-1403, 2024 May 02.
Article in En | MEDLINE | ID: mdl-38488504
ABSTRACT
The NCI's Cloud Resources (CR) are the analytical components of the Cancer Research Data Commons (CRDC) ecosystem. This review describes how the three CRs (Broad Institute FireCloud, Institute for Systems Biology Cancer Gateway in the Cloud, and Seven Bridges Cancer Genomics Cloud) provide access and availability to large, cloud-hosted, multimodal cancer datasets, as well as offer tools and workspaces for performing data analysis where the data resides, without download or storage. In addition, users can upload their own data and tools into their workspaces, allowing researchers to create custom analysis workflows and integrate CRDC-hosted data with their own. See related articles by Brady et al., p. 1384, Wang et al., p. 1388, and Kim et al., p. 1404.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: National Cancer Institute (U.S.) / Cloud Computing / Neoplasms Limits: Humans Country/Region as subject: America do norte Language: En Journal: Cancer Res Year: 2024 Document type: Article
Fulltext
Add to My VHL
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XML
PubMed Links
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: National Cancer Institute (U.S.) / Cloud Computing / Neoplasms Limits: Humans Country/Region as subject: America do norte Language: En Journal: Cancer Res Year: 2024 Document type: Article