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[In silico analysis of molecular mimicry between human aquaporin 3, Aspergillus fumigatus aquaporin and aquaporins from allergic sources]. / Análisis en silico del mimetismo molecular entre acuaporina 3 humana y Aspergillus fumigatus: implicaciones para el potencial de reactividad cruzada.
Sánchez, Andrés; Padilla, Yaquelin; Lorduy, Adriana; Sánchez, Jorge; Múnera, Marlon; Baena, Claudia; Bernal, Carlos; Urrego, Juan.
Affiliation
  • Sánchez A; Research Group of Pharmaceutical, Cosmetic and Food Technology. University of Cartagena, Cartagena, Colombia.
  • Padilla Y; Group of Clinical and Experimental Allergy. University of Antioquia, Medellín, Colombia.
  • Lorduy A; Group of Research Medicine. Rafael Núñez University Corporation. Cartagena, Colombia. andres.sanchez@curnvirtual.edu.co.
  • Sánchez J; Research Group of Pharmaceutical, Cosmetic and Food Technology. University of Cartagena, Cartagena, Colombia.
  • Múnera M; Research Group of Pharmaceutical, Cosmetic and Food Technology. University of Cartagena, Cartagena, Colombia.
  • Baena C; Group of Clinical and Experimental Allergy. University of Antioquia, Medellín, Colombia.
  • Bernal C; Group of Research Medicine. Rafael Núñez University Corporation. Cartagena, Colombia.
  • Urrego J; Research Group of Pharmaceutical, Cosmetic and Food Technology. University of Cartagena, Cartagena, Colombia.
Rev Alerg Mex ; 71(1): 56, 2024 Feb 01.
Article in Es | MEDLINE | ID: mdl-38683074
ABSTRACT

OBJECTIVE:

Conduct an in-silico assessment of potential molecular mimicry between human aquaporins, A. fumigatus, and diverse allergenic sources.

METHODS:

Amino acid sequences of human AQP3 and A. fumigatus aquaporin were compared through multiple alignments with 25 aquaporins from diverse allergenic sources. Phylogenetic analysis and homology-based modeling were executed, and the ElliPro server predicted conserved antigenic regions on 3D structures.

RESULTS:

Global identity among studied aquaporins was 32.6%, with a specific conserved local region at 71.4%. Five monophyletic clades (A-E) were formed, and Group B displayed the highest identity (95%), including 6 mammalian aquaporins, notably AQP3. A. fumigatus aquaporin exhibited the highest identity with Malassezia sympodialis (35%). Three linear and three discontinuous epitopes were identified in both human and A. fumigatus aquaporins. The Root Mean Square Deviation (RMSD) from overlapping aquaporin structures was 1.006.

CONCLUSION:

Identification of potential linear and conformational epitopes on human AQP3 suggests likely molecular mimicry with A. fumigatus aquaporins. High identity in a specific antigenic region indicates potential autoreactivity and a probable antigenic site involved in cross-reactivity. Validation through in vitro and in vivo studies is essential for further understanding and confirmation.
RESUMEN

OBJETIVO:

Realizar una evaluación in silico del posible mimetismo molecular entre las acuaporinas humanas, A. fumigatus y diversas fuentes alergénicas.

MÉTODOS:

Se compararon secuencias de aminoácidos de AQP3 humana y acuaporina de A. fumigatus mediante alineamientos múltiples con 25 acuaporinas de diversas fuentes alergénicas. Se ejecutaron análisis filogenéticos y modelos basados en homología, y el servidor ElliPro predijo regiones antigénicas preservadas en estructuras 3D.

RESULTADOS:

La identidad global entre las acuaporinas estudiadas fue del 32.6%, con una región local específica preservada en el 71.4%. Se formaron cinco clados monofiléticos (A-E), y el grupo B mostró la identidad más alta (95%), incluidas 6 acuaporinas de mamíferos, en particular AQP3. A. fumigatus aquaporin exhibió la mayor identidad con Malassezia sympodialis (35%). Se identificaron tres epítopos lineales y tres discontinuos en acuaporinas tanto humanas como de A. fumigatus. La desviación cuadrática media (RMSD) de las estructuras de acuaporinas superpuestas fue de 1,006.

CONCLUSIÓN:

La identificación de posibles epítopos lineales y conformacionales en AQP3 humano sugiere un probable mimetismo molecular con acuaporinas de A. fumigatus. La identidad alta en una región antigénica específica indica autorreactividad potencial y un sitio antigénico probable implicado en la reactividad cruzada. La validación mediante estudios in vitro e in vivo es desicivo para una mayor comprensión y confirmación.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Aspergillus fumigatus / Computer Simulation / Allergens / Molecular Mimicry / Aquaporins / Aquaporin 3 Limits: Humans Language: Es Journal: Rev Alerg Mex Journal subject: ALERGIA E IMUNOLOGIA Year: 2024 Document type: Article Affiliation country: Colombia

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Aspergillus fumigatus / Computer Simulation / Allergens / Molecular Mimicry / Aquaporins / Aquaporin 3 Limits: Humans Language: Es Journal: Rev Alerg Mex Journal subject: ALERGIA E IMUNOLOGIA Year: 2024 Document type: Article Affiliation country: Colombia