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tracerDB: a crowdsourced fluorescent tracer database for target engagement analysis.
Dopfer, Johannes; Vasta, James D; Müller, Susanne; Knapp, Stefan; Robers, Matthew B; Schwalm, Martin P.
Affiliation
  • Dopfer J; Institute of Pharmaceutical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 9, 60438, Frankfurt am Main, Germany.
  • Vasta JD; Structural Genomics Consortium, Goethe University Frankfurt, Buchmann Institute for Life Sciences, Max-von-Laue-Str. 15, 60438, Frankfurt am Main, Germany.
  • Müller S; Promega Corporation, Madison, WI, USA.
  • Knapp S; Institute of Pharmaceutical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 9, 60438, Frankfurt am Main, Germany.
  • Robers MB; Structural Genomics Consortium, Goethe University Frankfurt, Buchmann Institute for Life Sciences, Max-von-Laue-Str. 15, 60438, Frankfurt am Main, Germany.
  • Schwalm MP; Institute of Pharmaceutical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 9, 60438, Frankfurt am Main, Germany.
Nat Commun ; 15(1): 5646, 2024 Jul 05.
Article in En | MEDLINE | ID: mdl-38969708
ABSTRACT
Investigating ligand-protein complexes is essential in the areas of chemical biology and drug discovery. However, detailed information on key reagents such as fluorescent tracers and associated data for the development of widely used bioluminescence resonance energy transfer (BRET) assays including NanoBRET, time-resolved Förster resonance energy transfer (TR-FRET) and fluorescence polarization (FP) assays are not easily accessible to the research community. We created tracerDB, a curated database of validated tracers. This resource provides an open access knowledge base and a unified system for tracer and assay validation. The database is freely available at https//www.tracerdb.org/ .
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Fluorescence Resonance Energy Transfer Limits: Humans Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2024 Document type: Article Affiliation country: Alemania

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Fluorescence Resonance Energy Transfer Limits: Humans Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2024 Document type: Article Affiliation country: Alemania