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The abundant fraction of soil microbiomes regulates the rhizosphere function in crop wild progenitors.
de Celis, Miguel; Fernández-Alonso, María José; Belda, Ignacio; García, Carlos; Ochoa-Hueso, Raúl; Palomino, Javier; Singh, Brajesh K; Yin, Yue; Wang, Jun-Tao; Abdala-Roberts, Luis; Alfaro, Fernando D; Angulo-Pérez, Diego; Arthikala, Manoj-Kumar; Corwin, Jason; Gui-Lan, Duan; Hernandez-Lopez, Antonio; Nanjareddy, Kalpana; Pasari, Babak; Quijano-Medina, Teresa; Rivera, Daniela S; Shaaf, Salar; Trivedi, Pankaj; Yang, Qingwen; Zaady, Eli; Zhu, Yong-Guan; Delgado-Baquerizo, Manuel; Milla, Rubén; García-Palacios, Pablo.
Affiliation
  • de Celis M; Departamento de Suelo, Planta y Calidad Ambiental, Instituto de Ciencias Agrarias, Consejo Superior de Investigaciones Científicas, Madrid, Spain.
  • Fernández-Alonso MJ; Area of Biodiversity and Conservation, Department of Biology and Geology, Physics and Inorganic Chemistry, Universidad Rey Juan Carlos, Móstoles, Spain.
  • Belda I; Departamento de Geología y Geoquímica, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid, Spain.
  • García C; Department of Genetics, Physiology and Microbiology, Microbiology Unit, Faculty of Biology, Complutense University of Madrid, Madrid, Spain.
  • Ochoa-Hueso R; Department of Soil and Water Conservation and Organic Waste Management, CEBAS-CSIC, Murcia, Spain.
  • Palomino J; Department of Biology, IVAGRO, University of Cádiz, Cádiz, Spain.
  • Singh BK; Area of Biodiversity and Conservation, Department of Biology and Geology, Physics and Inorganic Chemistry, Universidad Rey Juan Carlos, Móstoles, Spain.
  • Yin Y; Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia.
  • Wang JT; Global Centre for Land-Based Innovation, Western Sydney University, Penrith, New South Wales, Australia.
  • Abdala-Roberts L; State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China.
  • Alfaro FD; Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia.
  • Angulo-Pérez D; Global Centre for Land-Based Innovation, Western Sydney University, Penrith, New South Wales, Australia.
  • Arthikala MK; Departamento de Ecología Tropical, Universidad Autónoma de Yucatán, Mérida, Yucatán, Mexico.
  • Corwin J; GEMA Center for Genomics, Ecology and Environment, Universidad Mayor, Santiago, Chile.
  • Gui-Lan D; Unidad de Recursos Naturales, Centro de Investigación Científica de Yucatán, A.C., Mérida, Yucatán, Mexico.
  • Hernandez-Lopez A; Ciencias Agrogenómicas, Escuela Nacional de Estudios Superiores Unidad León-Universidad Nacional Autónoma de México (UNAM), León, Guanajuato, Mexico.
  • Nanjareddy K; Microbiome Network and Department of Agricultural Biology, Colorado State University, Fort Collins, Colorado, USA.
  • Pasari B; State Key Lab of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China.
  • Quijano-Medina T; Escuela Nacional de Estudios Superiores Unidad León, Universidad Nacional Autónoma de México, Guanajuato, Mexico.
  • Rivera DS; Ciencias Agrogenómicas, Escuela Nacional de Estudios Superiores Unidad León-Universidad Nacional Autónoma de México (UNAM), León, Guanajuato, Mexico.
  • Shaaf S; Department of Agronomy and Plant Breeding, Sanandaj Branch, Islamic Azad University, Sanandaj, Iran.
  • Trivedi P; Departamento de Ecología Tropical, Universidad Autónoma de Yucatán, Mérida, Yucatán, Mexico.
  • Yang Q; GEMA Center for Genomics, Ecology and Environment, Universidad Mayor, Santiago, Chile.
  • Zaady E; Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Seeland, Germany.
  • Zhu YG; Microbiome Network and Department of Agricultural Biology, Colorado State University, Fort Collins, Colorado, USA.
  • Delgado-Baquerizo M; National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
  • Milla R; Department of Natural Resources, Agricultural Research Organization, Gilat Research Center, Institute of Plant Sciences, Mobile Post Negev, Israel.
  • García-Palacios P; Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, China.
Ecol Lett ; 27(6): e14462, 2024 Jun.
Article in En | MEDLINE | ID: mdl-39031813
ABSTRACT
The rhizosphere influence on the soil microbiome and function of crop wild progenitors (CWPs) remains virtually unknown, despite its relevance to develop microbiome-oriented tools in sustainable agriculture. Here, we quantified the rhizosphere influence-a comparison between rhizosphere and bulk soil samples-on bacterial, fungal, protists and invertebrate communities and on soil multifunctionality across nine CWPs at their sites of origin. Overall, rhizosphere influence was higher for abundant taxa across the four microbial groups and had a positive influence on rhizosphere soil organic C and nutrient contents compared to bulk soils. The rhizosphere influence on abundant soil microbiomes was more important for soil multifunctionality than rare taxa and environmental conditions. Our results are a starting point towards the use of CWPs for rhizosphere engineering in modern crops.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Soil Microbiology / Crops, Agricultural / Rhizosphere / Microbiota Limits: Animals Language: En Journal: Ecol Lett Year: 2024 Document type: Article Affiliation country: España
Fulltext
Add to My VHL
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Soil Microbiology / Crops, Agricultural / Rhizosphere / Microbiota Limits: Animals Language: En Journal: Ecol Lett Year: 2024 Document type: Article Affiliation country: España