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Physics-informed deep generative learning for quantitative assessment of the retina.
Brown, Emmeline E; Guy, Andrew A; Holroyd, Natalie A; Sweeney, Paul W; Gourmet, Lucie; Coleman, Hannah; Walsh, Claire; Markaki, Athina E; Shipley, Rebecca; Rajendram, Ranjan; Walker-Samuel, Simon.
Affiliation
  • Brown EE; Centre for Computational Medicine, University College London, London, UK.
  • Guy AA; Moorfields Eye Hospital, London, UK.
  • Holroyd NA; Centre for Computational Medicine, University College London, London, UK.
  • Sweeney PW; Department of Engineering, University of Cambridge, Cambridge, UK.
  • Gourmet L; Centre for Computational Medicine, University College London, London, UK.
  • Coleman H; Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.
  • Walsh C; Centre for Computational Medicine, University College London, London, UK.
  • Markaki AE; Centre for Computational Medicine, University College London, London, UK.
  • Shipley R; Centre for Computational Medicine, University College London, London, UK.
  • Rajendram R; Department of Mechanical Engineering, University College London, London, UK.
  • Walker-Samuel S; Department of Engineering, University of Cambridge, Cambridge, UK.
Nat Commun ; 15(1): 6859, 2024 Aug 10.
Article in En | MEDLINE | ID: mdl-39127778
ABSTRACT
Disruption of retinal vasculature is linked to various diseases, including diabetic retinopathy and macular degeneration, leading to vision loss. We present here a novel algorithmic approach that generates highly realistic digital models of human retinal blood vessels, based on established biophysical principles, including fully-connected arterial and venous trees with a single inlet and outlet. This approach, using physics-informed generative adversarial networks (PI-GAN), enables the segmentation and reconstruction of blood vessel networks with no human input and which out-performs human labelling. Segmentation of DRIVE and STARE retina photograph datasets provided near state-of-the-art vessel segmentation, with training on only a small (n = 100) simulated dataset. Our findings highlight the potential of PI-GAN for accurate retinal vasculature characterization, with implications for improving early disease detection, monitoring disease progression, and improving patient care.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Retina / Retinal Vessels / Algorithms / Deep Learning Limits: Humans Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2024 Document type: Article Country of publication: Reino Unido

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Retina / Retinal Vessels / Algorithms / Deep Learning Limits: Humans Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2024 Document type: Article Country of publication: Reino Unido