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Metagenomic analysis reveals high diversity of gut viromes in yaks (Bos grunniens) from the Qinghai-Tibet Plateau.
Lu, Xiang; Gong, Ga; Zhang, Qing; Yang, Shixing; Wu, Haisheng; Zhao, Min; Wang, Xiaochun; Shen, Quan; Ji, Likai; Liu, Yuwei; Wang, Yongshun; Liu, Jia; Suolang, Sizhu; Ma, Xiao; Shan, Tongling; Zhang, Wen.
Affiliation
  • Lu X; Department of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
  • Gong G; Animal Science College, Tibet Agriculture and Animal Husbandry University, Nyingchi, Tibet, China.
  • Zhang Q; Qinghai Institute of Endemic Disease Prevention and Control, Xining, China.
  • Yang S; Department of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
  • Wu H; Department of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
  • Zhao M; Qinghai Institute of Endemic Disease Prevention and Control, Xining, China.
  • Wang X; Department of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
  • Shen Q; Department of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
  • Ji L; Department of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
  • Liu Y; Department of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
  • Wang Y; Department of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
  • Liu J; Qinghai Institute of Endemic Disease Prevention and Control, Xining, China.
  • Suolang S; Qinghai Institute of Endemic Disease Prevention and Control, Xining, China.
  • Ma X; Animal Science College, Tibet Agriculture and Animal Husbandry University, Nyingchi, Tibet, China. xzslsz@163.com.
  • Shan T; Qinghai Institute of Endemic Disease Prevention and Control, Xining, China. maxiao0971@163.com.
  • Zhang W; Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, 200241, China. shantongling@shvri.ac.cn.
Commun Biol ; 7(1): 1097, 2024 Sep 06.
Article in En | MEDLINE | ID: mdl-39242698
ABSTRACT
The Qinghai-Tibet Plateau (QTP), renowned for its exceptional biological diversity, is home to numerous endemic species. However, research on the virology of vulnerable vertebrates like yaks remains limited. In this study, our objective was to use metagenomics to provide a comprehensive understanding of the diversity and evolution of the gut virome in yak populations across different regions of the QTP. Our findings revealed a remarkably diverse array of viruses in the gut of yaks, including those associated with vertebrates and bacteriophages. Notably, some vertebrate-associated viruses, such as astrovirus and picornavirus, showed significant sequence identity across diverse yak populations. Additionally, we observed differences in the functional profiles of genes carried by the yak gut virome across different regions. Moreover, the virus-bacterium symbiotic network that we discovered holds potential significance in maintaining the health of yaks. Overall, this research expands our understanding of the viral communities in the gut of yaks and highlights the importance of further investigating the interactions between viruses and their hosts. These data will be beneficial for revealing the crucial role that viruses play in the yak gut ecology in future studies.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Metagenomics / Gastrointestinal Microbiome / Virome Limits: Animals Country/Region as subject: Asia Language: En Journal: Commun Biol Year: 2024 Document type: Article Affiliation country: China Country of publication: Reino Unido

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Metagenomics / Gastrointestinal Microbiome / Virome Limits: Animals Country/Region as subject: Asia Language: En Journal: Commun Biol Year: 2024 Document type: Article Affiliation country: China Country of publication: Reino Unido