Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences.

Jensen, Mark A; Li, Fu-Sheng; van 't Wout, Angélique B; Nickle, David C; Shriner, Daniel; He, Hong-Xia; McLaughlin, Sherry; Shankarappa, Raj; Margolick, Joseph B; Mullins, James I

Jensen, Mark A; Li, Fu-Sheng; van 't Wout, Angélique B; Nickle, David C; Shriner, Daniel; He, Hong-Xia; McLaughlin, Sherry; Shankarappa, Raj; Margolick, Joseph B; Mullins, James I.

Affiliation

Jensen MA; Department of Microbiology, University of Washington, Seattle, Washington 98195-8070, USA. majensen@u.washington.edu

J Virol ; 77(24): 13376-88, 2003 Dec.

Article in En | MEDLINE | ID: mdl-14645592

Subject(s)

Computational Biology/methods; HIV Envelope Protein gp120/genetics; HIV Infections/virology; HIV-1/classification; Peptide Fragments/genetics; Receptors, CCR5/metabolism; Receptors, CXCR4/metabolism; Evolution, Molecular; Genotype; HIV Envelope Protein gp120/chemistry; HIV-1/genetics; HIV-1/metabolism; Humans; Molecular Sequence Data; Peptide Fragments/chemistry; Phenotype; Phylogeny; Predictive Value of Tests; Sequence Analysis, DNA

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Peptide Fragments / HIV Envelope Protein gp120 / HIV Infections / HIV-1 / Computational Biology / Receptors, CCR5 / Receptors, CXCR4 Type of study: Evaluation_studies / Prognostic_studies / Risk_factors_studies Limits: Humans Language: En Journal: J Virol Year: 2003 Document type: Article Affiliation country: United States Country of publication: United States

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