fREDUCE: detection of degenerate regulatory elements using correlation with expression.

Wu, Randy Z; Chaivorapol, Christina; Zheng, Jiashun; Li, Hao; Liang, Shoudan

Wu, Randy Z; Chaivorapol, Christina; Zheng, Jiashun; Li, Hao; Liang, Shoudan.

Affiliation

Wu RZ; Department of Biochemistry and Biophysics, UCSF, 1700 4th Street, San Francisco, CA 94143-2542, USA. rwu@genome.ucsf.edu

BMC Bioinformatics ; 8: 399, 2007 Oct 17.

Article in En | MEDLINE | ID: mdl-17941998

Subject(s)

Algorithms; Genomics/methods; Regulatory Sequences, Nucleic Acid; Transcription, Genetic; Amino Acid Motifs; Base Sequence; Binding Sites; Computational Biology; Gene Expression Profiling; Hepatocytes; Humans; Saccharomyces cerevisiae/genetics; Substrate Specificity

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Transcription, Genetic / Algorithms / Regulatory Sequences, Nucleic Acid / Genomics Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: BMC Bioinformatics Journal subject: INFORMATICA MEDICA Year: 2007 Document type: Article Affiliation country: United States Country of publication: United kingdom

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