Using a novel resource to decrease proteomic biomarker identification time.
AMIA Annu Symp Proc
; : 1033, 2008 Nov 06.
Article
in En
| MEDLINE
| ID: mdl-18999243
ABSTRACT
The Empirical Proteomic Ontology Knowledge Base (EPO-KB) is an online database that represents current knowledge of biomarkers and contains associations between mass-to-charge (m/z) ratios of mass-spectrometry peaks to proteins. Such a database is a useful tool for identifying putative proteins associated with a m/z ratio. At present, EPO-KB contains data that have been extracted from 120 published research papers. It has been used in successful identification of a protein associated with a biomarker.
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Collection:
01-internacional
Database:
MEDLINE
Main subject:
Natural Language Processing
/
Peptide Mapping
/
User-Computer Interface
/
Biomarkers
/
Information Storage and Retrieval
/
Proteome
/
Databases, Protein
Type of study:
Diagnostic_studies
Language:
En
Journal:
AMIA Annu Symp Proc
Journal subject:
INFORMATICA MEDICA
Year:
2008
Document type:
Article
Affiliation country:
United States
Publication country:
EEUU
/
ESTADOS UNIDOS
/
ESTADOS UNIDOS DA AMERICA
/
EUA
/
UNITED STATES
/
UNITED STATES OF AMERICA
/
US
/
USA