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Targeting serpins in high-throughput and structure-based drug design.
Chang, Yi-Pin; Mahadeva, Ravi; Patschull, Anathe O M; Nobeli, Irene; Ekeowa, Ugo I; McKay, Adam R; Thalassinos, Konstantinos; Irving, James A; Haq, Imran; Nyon, Mun Peak; Christodoulou, John; Ordóñez, Adriana; Miranda, Elena; Gooptu, Bibek.
Affiliation
  • Chang YP; Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford, United Kingdom.
Methods Enzymol ; 501: 139-75, 2011.
Article in En | MEDLINE | ID: mdl-22078534
Native, metastable serpins inherently tend to undergo stabilizing conformational transitions in mechanisms of health (e.g., enzyme inhibition) and disease (serpinopathies). This intrinsic tendency is modifiable by ligand binding, thus structure-based drug design is an attractive strategy in the serpinopathies. This can be viewed as a labor-intensive approach, and historically, its intellectual attractiveness has been tempered by relatively limited success in development of drugs reaching clinical practice. However, the increasing availability of a range of powerful experimental systems and higher-throughput techniques is causing academic and early-stage industrial pharmaceutical approaches to converge. In this review, we outline the different systems and techniques that are bridging the gap between what have traditionally been considered distinct disciplines. The individual methods are not serpin-specific. Indeed, many have only recently been applied to serpins, and thus investigators in other fields may have greater experience of their use to date. However, by presenting examples from our work and that of other investigators in the serpin field, we highlight how techniques with potential for automation and scaling can be combined to address a range of context-specific challenges in targeting the serpinopathies.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Mass Spectrometry / Drug Design / Alpha 1-Antitrypsin / Combinatorial Chemistry Techniques / Electrophoresis, Polyacrylamide Gel / Small Molecule Libraries / High-Throughput Screening Assays Type of study: Prognostic_studies Limits: Humans Language: En Journal: Methods Enzymol Year: 2011 Document type: Article Affiliation country: United kingdom Country of publication: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Mass Spectrometry / Drug Design / Alpha 1-Antitrypsin / Combinatorial Chemistry Techniques / Electrophoresis, Polyacrylamide Gel / Small Molecule Libraries / High-Throughput Screening Assays Type of study: Prognostic_studies Limits: Humans Language: En Journal: Methods Enzymol Year: 2011 Document type: Article Affiliation country: United kingdom Country of publication: United States