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MLVF analysis of anginosus (milleri) group streptococci.
Obszanska, Katarzyna; Kern-Zdanowicz, Izabella; Sitkiewicz, Izabela.
Affiliation
  • Obszanska K; Department of Microbial Biochemistry, Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawinskiego 5a, 02-106 Warszawa, Poland.
  • Kern-Zdanowicz I; Department of Microbial Biochemistry, Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawinskiego 5a, 02-106 Warszawa, Poland.
  • Sitkiewicz I; Department of Molecular Microbiology, National Medicines Institute, Chelmska 30/34, 00-725, Warszawa, Poland. Electronic address: iza.sitkiewicz@gmail.com.
Diagn Microbiol Infect Dis ; 83(2): 124-9, 2015 Oct.
Article in En | MEDLINE | ID: mdl-26234478
ABSTRACT
We developed a new method of typing for anginosus group streptococci (SAG). It is the first SAG-dedicated, PCR-based method, which allows to determine the relationship between strains. The method is based on the detection of tandem repeats among 9 genomic loci and is classified as multilocus variable number tandem repeats fingerprint (MLVF) type of analysis. Using the described method, it is possible to detect over half million MLVF patterns, which correlate with pulsed-field gel electrophoresis profiles. The other advantage of the method is relatively short time from "cell to data", low costs, and easy application for epidemiological and evolutionary studies.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Streptococcus / DNA Fingerprinting / Minisatellite Repeats / Molecular Typing / Genotype Type of study: Health_economic_evaluation Limits: Humans Language: En Journal: Diagn Microbiol Infect Dis Year: 2015 Document type: Article Affiliation country: Poland

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Streptococcus / DNA Fingerprinting / Minisatellite Repeats / Molecular Typing / Genotype Type of study: Health_economic_evaluation Limits: Humans Language: En Journal: Diagn Microbiol Infect Dis Year: 2015 Document type: Article Affiliation country: Poland