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CC/DFT Route toward Accurate Structures and Spectroscopic Features for Observed and Elusive Conformers of Flexible Molecules: Pyruvic Acid as a Case Study.
Barone, Vincenzo; Biczysko, Malgorzata; Bloino, Julien; Cimino, Paola; Penocchio, Emanuele; Puzzarini, Cristina.
Affiliation
  • Barone V; Scuola Normale Superiore, Piazza dei Cavalieri 7, I-56126 Pisa, Pisa, Italy.
  • Biczysko M; Consiglio Nazionale delle Ricerche, Istituto di Chimica dei Composti OrganoMetallici (ICCOM-CNR), UOS di Pisa, Area della Ricerca CNR, Via G. Moruzzi 1, I-56124 Pisa, Pisa, Italy.
  • Bloino J; Consiglio Nazionale delle Ricerche, Istituto di Chimica dei Composti OrganoMetallici (ICCOM-CNR), UOS di Pisa, Area della Ricerca CNR, Via G. Moruzzi 1, I-56124 Pisa, Pisa, Italy.
  • Cimino P; Dipartimento di Scienze Farmaceutiche, Università degli Studi di Salerno , via Ponte don Melillo, I-84084 Fisciano, Salerno, Italy.
  • Penocchio E; Scuola Normale Superiore, Piazza dei Cavalieri 7, I-56126 Pisa, Pisa, Italy.
  • Puzzarini C; Dipartimento di Chimica "Giacomo Ciamician", Università di Bologna , Via Selmi 2, I-40126 Bologna, Bologna, Italy.
J Chem Theory Comput ; 11(9): 4342-63, 2015 Sep 08.
Article in En | MEDLINE | ID: mdl-26575928
The structures and relative stabilities as well as the rotational and vibrational spectra of the three low-energy conformers of pyruvic acid (PA) have been characterized using a state-of-the-art quantum-mechanical approach designed for flexible molecules. By making use of the available experimental rotational constants for several isotopologues of the most stable PA conformer, Tc-PA, the semiexperimental equilibrium structure has been derived. The latter provides a reference for the pure theoretical determination of the equilibrium geometries for all conformers, thus confirming for these structures an accuracy of 0.001 Å and 0.1 deg for bond lengths and angles, respectively. Highly accurate relative energies of all conformers (Tc-, Tt-, and Ct-PA) and of the transition states connecting them are provided along with the thermodynamic properties at low and high temperatures, thus leading to conformational enthalpies accurate to 1 kJ mol(-1). Concerning microwave spectroscopy, rotational constants accurate to about 20 MHz are provided for the Tt- and Ct-PA conformers, together with the computed centrifugal-distortion constants and dipole moments required to simulate their rotational spectra. For Ct-PA, vibrational frequencies in the mid-infrared region accurate to 10 cm(-1) are reported along with theoretical estimates for the transitions in the near-infrared range, and the corresponding infrared spectrum including fundamental transitions, overtones, and combination bands has been simulated. In addition to the new data described above, theoretical results for the Tc- and Tt-PA conformers are compared with all available experimental data to further confirm the accuracy of the hybrid coupled-cluster/density functional theory (CC/DFT) protocol applied in the present study. Finally, we discuss in detail the accuracy of computational models fully based on double-hybrid DFT functionals (mainly at the B2PLYP/aug-cc-pVTZ level) that avoid the use of very expensive CC calculations.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Quantum Theory / Pyruvic Acid Language: En Journal: J Chem Theory Comput Year: 2015 Document type: Article Affiliation country: Italy Country of publication: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Quantum Theory / Pyruvic Acid Language: En Journal: J Chem Theory Comput Year: 2015 Document type: Article Affiliation country: Italy Country of publication: United States