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From Discovery to Translation: Characterization of C-Mannosyltryptophan and Pseudouridine as Markers of Kidney Function.
Sekula, Peggy; Dettmer, Katja; Vogl, Franziska C; Gronwald, Wolfram; Ellmann, Lisa; Mohney, Robert P; Eckardt, Kai-Uwe; Suhre, Karsten; Kastenmüller, Gabi; Oefner, Peter J; Köttgen, Anna.
Affiliation
  • Sekula P; Institute of Genetic Epidemiology, Faculty of Medicine and Medical Center - University of Freiburg, Hugstetter Str. 49, 79106, Freiburg, Germany. ps@imbi.uni-freiburg.de.
  • Dettmer K; Institute of Functional Genomics, University of Regensburg, Am BioPark 9, 93053, Regensburg, Germany.
  • Vogl FC; Institute of Functional Genomics, University of Regensburg, Am BioPark 9, 93053, Regensburg, Germany.
  • Gronwald W; Institute of Functional Genomics, University of Regensburg, Am BioPark 9, 93053, Regensburg, Germany.
  • Ellmann L; Institute of Functional Genomics, University of Regensburg, Am BioPark 9, 93053, Regensburg, Germany.
  • Mohney RP; Metabolon, Inc., Durham, NC, USA.
  • Eckardt KU; Department of Nephrology and Hypertension, University of Erlangen-Nürnberg, 91054, Erlangen, Germany.
  • Suhre K; Department of Physiology and Biophysics, Weill Cornell Medicine - Qatar, PO 24144, Doha, Qatar.
  • Kastenmüller G; Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum München - German Research Center for Environmental Health, 85764, Neuherberg, Germany.
  • Oefner PJ; German Center for Diabetes Research (DZD), 85764, Neuherberg, Germany.
  • Köttgen A; Department of Twin Research and Genetic Epidemiology, Kings College London, London, United Kingdom.
Sci Rep ; 7(1): 17400, 2017 12 12.
Article in En | MEDLINE | ID: mdl-29234020
Using a non-targeted metabolomics platform, we recently identified C-mannosyltryptophan and pseudouridine as non-traditional kidney function markers. The aims of this study were to obtain absolute concentrations of both metabolites in blood and urine from individuals with and without CKD to provide reference ranges and to assess their fractional excretions (FE), and to assess the agreement with their non-targeted counterparts. In individuals without/with CKD, mean plasma and urine concentrations for C-mannosyltryptophan were 0.26/0.72 µmol/L and 3.39/4.30 µmol/mmol creatinine, respectively. The respective concentrations for pseudouridine were 2.89/5.67 µmol/L and 39.7/33.9 µmol/mmol creatinine. Median (25th, 75th percentiles) FEs were 70.8% (65.6%, 77.8%) for C-mannosyltryptophan and 76.0% (68.6%, 82.4%) for pseudouridine, indicating partial net reabsorption. Association analyses validated reported associations between single metabolites and eGFR. Targeted measurements of both metabolites agreed well with the non-targeted measurements, especially in urine. Agreement for composite nephrological measures FE and urinary metabolite-to-creatinine ratio was lower, but could be improved by replacing non-targeted creatinine measurements with a standard clinical creatinine test. In summary, targeted quantification and additional characterization in relevant populations are necessary steps in the translation of non-traditional biomarkers in nephrology from non-targeted discovery to clinical application.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Pseudouridine / Tryptophan Type of study: Observational_studies / Prevalence_studies / Risk_factors_studies Limits: Adult / Female / Humans / Male / Middle aged Language: En Journal: Sci Rep Year: 2017 Document type: Article Affiliation country: Germany Country of publication: United kingdom

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Pseudouridine / Tryptophan Type of study: Observational_studies / Prevalence_studies / Risk_factors_studies Limits: Adult / Female / Humans / Male / Middle aged Language: En Journal: Sci Rep Year: 2017 Document type: Article Affiliation country: Germany Country of publication: United kingdom