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Leveraging human genetic and adverse outcome pathway (AOP) data to inform susceptibility in human health risk assessment.
Mortensen, Holly M; Chamberlin, John; Joubert, Bonnie; Angrish, Michelle; Sipes, Nisha; Lee, Janice S; Euling, Susan Y.
Affiliation
  • Mortensen HM; NHEERL, US Environmental Protection Agency, Research Triangle Park, NC, 27709, USA. mortensen.holly@epa.gov.
  • Chamberlin J; Oak Ridge Associated Universities, Research Triangle Park, NC, 27709, USA.
  • Joubert B; National Institute of Environmental Health Sciences, Research Triangle Park, NC, 27709, USA.
  • Angrish M; NCEA, US Environmental Protection Agency, Research Triangle Park, NC, USA.
  • Sipes N; NTP, National Institute of Environmental Health Sciences, Research Triangle Park, NC, 27709, USA.
  • Lee JS; NCEA, US Environmental Protection Agency, Research Triangle Park, NC, USA.
  • Euling SY; NCEA, US Environmental Protection Agency, Washington, DC, 20460, USA.
Mamm Genome ; 29(1-2): 190-204, 2018 02.
Article in En | MEDLINE | ID: mdl-29476236
Estimation of susceptibility differences in human health risk assessment (HHRA) has been challenged by a lack of available susceptibility and variability data after exposure to a specific environmental chemical or pharmaceutical. With the increasingly large number of available data sources that contain polymorphism and other genetic data, human genetic variability that informs susceptibility can be better incorporated into HHRA. A recent policy, the 2016 The Frank R. Lautenberg Chemical Safety for the twenty-first Century Act, requires the US Environmental Protection Agency to evaluate new and existing toxic chemicals with explicit consideration of susceptible populations of all types (life stage, exposure, genetic, etc.). We propose using the adverse outcome pathway (AOP) construct to organize, identify, and characterize human genetic susceptibility in HHRA. We explore how publicly available human genetic datasets can be used to gain mechanistic understanding of molecular events and characterize human susceptibility for an adverse outcome. We present a computational method that implements publicly available human genetic data to prioritize AOPs with potential for human genetic variability. We describe the application of this approach across multiple described AOPs for health outcomes of interest, and by focusing on a single molecular initiating event. This contributes to a long-term goal to improve estimates of human susceptibility for use in HHRA for single and multiple chemicals.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome, Human / Risk Assessment / Genetic Predisposition to Disease Type of study: Etiology_studies / Risk_factors_studies Limits: Humans Language: En Journal: Mamm Genome Journal subject: GENETICA Year: 2018 Document type: Article Affiliation country: United States Country of publication: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome, Human / Risk Assessment / Genetic Predisposition to Disease Type of study: Etiology_studies / Risk_factors_studies Limits: Humans Language: En Journal: Mamm Genome Journal subject: GENETICA Year: 2018 Document type: Article Affiliation country: United States Country of publication: United States