Microsatellite loci obtained by next generation sequencing on the sablefish (Anoplopoma fimbria).
Mol Biol Rep
; 45(5): 1523-1526, 2018 Oct.
Article
in En
| MEDLINE
| ID: mdl-29974317
Eleven microsatellite loci were developed and characterized for the sablefish, Anoplopoma fimbria. The markers were identified from sequences obtained by next generation sequencing. Thirty samples from Aleutians Islands were genotyped. The amplifications were performed with three different annealing temperature and amplification products were visualized in ABI 3500 Genetic Analyzer. No evidence for scoring errors was detected by stuttering or due large allele dropout and neither of the loci presented a high null allele frequency (> 0.2). The number means of alleles per locus was of 12.21 and mean of observed and expected heterozygosity were of 0.60 and 0.75 respectively. The sablefish represents a resource of high commercial value on the coasts of Japan, Russia, Canada and west coast of the United States and these new primers could be useful to future diversity and structure population studies.
Key words
Full text:
1
Collection:
01-internacional
Database:
MEDLINE
Main subject:
Perciformes
/
Microsatellite Repeats
Type of study:
Prognostic_studies
Limits:
Animals
Language:
En
Journal:
Mol Biol Rep
Year:
2018
Document type:
Article
Affiliation country:
Mexico
Country of publication:
Netherlands