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Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants.
Jung, Jong-Hyun; Joe, Min-Ho; Kim, Dong-Ho; Park, Hyun; Choi, Jong-Il; Lim, Sangyong.
Affiliation
  • Jung JH; 1Research Division for Biotechnology, Korea Atomic Energy Research Institute, Jeongeup, 56212 Republic of Korea.
  • Joe MH; 2Department of Radiation Biotechnology and Applied Radioisotope Science, University of Science and Technology, Daejeon, 34113 Republic of Korea.
  • Kim DH; 1Research Division for Biotechnology, Korea Atomic Energy Research Institute, Jeongeup, 56212 Republic of Korea.
  • Park H; 1Research Division for Biotechnology, Korea Atomic Energy Research Institute, Jeongeup, 56212 Republic of Korea.
  • Choi JI; 3Korea Polar Research Institute, Incheon, 21990 Republic of Korea.
  • Lim S; 4Department of Biotechnology and Bioengineering, Chonnam National University, Gwangju, 61186 Republic of Korea.
Stand Genomic Sci ; 13: 31, 2018.
Article in En | MEDLINE | ID: mdl-30455841
ABSTRACT
The Planococcus sp. PAMC21323 is a yellow pigment-producing bacterium isolated from King George Island in Antarctica; it has a broad growth temperature range of 5-40 °C. Herein, we describe the complete genome sequence information of the genus Planococcus with its annotated sequence, genetic features for bioremediation, and oxidative stress capacity. The Planococcus sp. PAMC21323 possesses chromosomal DNA (3,196,500-bp) with plasmid DNA (3364-bp). The complete 3,199,864-bp of the genome consists of 3171 genes including 60 transfer RNAs and 24 ribosomal RNAs. Strain PAMC21323 encodes various genes associated with detoxification of heavy metal ions and aromatic hydrocarbons. Moreover, it is equipped with diverse stress response systems, which can be used to sense the internal and oxidative stresses caused by detoxification. This is the first report highlighting the genetic potential of Planococcus sp. PAMC21323 in bioremediation, suggesting application of this psychrotrophic strain in bioremediation in harsh environments.
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Stand Genomic Sci Year: 2018 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Stand Genomic Sci Year: 2018 Document type: Article
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