GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data.

Ahmed, Nauman; Lévy, Jonathan; Ren, Shanshan; Mushtaq, Hamid; Bertels, Koen; Al-Ars, Zaid

Ahmed, Nauman; Lévy, Jonathan; Ren, Shanshan; Mushtaq, Hamid; Bertels, Koen; Al-Ars, Zaid.

Affiliation

Ahmed N; Delft University of Technology, Delft, Netherlands and University of Engineering and Technology, Lahore, Pakistan. n.ahmed@tudelft.nl.
Lévy J; Delft University of Technology, Netherlands, Delft, Netherlands.
Ren S; Delft University of Technology, Netherlands, Delft, Netherlands.
Mushtaq H; Maastricht UMC+, Netherlands, Maastricht, Netherlands.
Bertels K; Delft University of Technology, Netherlands, Delft, Netherlands.
Al-Ars Z; Delft University of Technology, Netherlands, Delft, Netherlands.

BMC Bioinformatics ; 20(1): 520, 2019 Oct 25.

Article in En | MEDLINE | ID: mdl-31653208

Subject(s)

Gene Library; High-Throughput Nucleotide Sequencing; Sequence Alignment; Software; Algorithms; Computational Biology; DNA/genetics; RNA/genetics; Sequence Analysis, DNA; Sequence Analysis, RNA

Key words

GPU library; Genomics; NGS; Sequence alignment

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Software / Gene Library / Sequence Alignment / High-Throughput Nucleotide Sequencing Language: En Journal: BMC Bioinformatics Journal subject: INFORMATICA MEDICA Year: 2019 Document type: Article Affiliation country: Pakistan Country of publication: United kingdom

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