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PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S ribosomal RNA, ITS, and COI marker genes.
Zafeiropoulos, Haris; Viet, Ha Quoc; Vasileiadou, Katerina; Potirakis, Antonis; Arvanitidis, Christos; Topalis, Pantelis; Pavloudi, Christina; Pafilis, Evangelos.
Affiliation
  • Zafeiropoulos H; Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Former U.S. Base of Gournes P.O. Box 2214, 71003, Heraklion, Crete, Greece.
  • Viet HQ; Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Former U.S. Base of Gournes P.O. Box 2214, 71003, Heraklion, Crete, Greece.
  • Vasileiadou K; Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Former U.S. Base of Gournes P.O. Box 2214, 71003, Heraklion, Crete, Greece.
  • Potirakis A; Charles University, Department of Ecology, Faculty of Science, Vinicná 7, CZ-12844, Prague, Czech Republic.
  • Arvanitidis C; Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Former U.S. Base of Gournes P.O. Box 2214, 71003, Heraklion, Crete, Greece.
  • Topalis P; Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Former U.S. Base of Gournes P.O. Box 2214, 71003, Heraklion, Crete, Greece.
  • Pavloudi C; LifeWatch ERIC, Plaza España SN, SECTOR II-III 41013, Seville,Spain.
  • Pafilis E; Institute of Molecular Biology and Biotechnology (IMBB), Foundation for Research and Technology (FORTH), Foundation for Research and Technology - Hellas, N. Plastira 100, GR-70013, Heraklion, Crete, Greece.
Gigascience ; 9(3)2020 03 01.
Article in En | MEDLINE | ID: mdl-32161947
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Metagenomics / DNA Barcoding, Taxonomic / DNA, Environmental Type of study: Diagnostic_studies / Prognostic_studies Limits: Animals Language: En Journal: Gigascience Year: 2020 Document type: Article Affiliation country: Greece Country of publication: United States
Fulltext
Add to My VHL
Print
XML
PubMed Links
Search on Google

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Metagenomics / DNA Barcoding, Taxonomic / DNA, Environmental Type of study: Diagnostic_studies / Prognostic_studies Limits: Animals Language: En Journal: Gigascience Year: 2020 Document type: Article Affiliation country: Greece Country of publication: United States