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Formosa sediminum sp. nov., a starch-degrading bacterium isolated from marine sediment.
Han, Bit; Kim, Minji; Lee, Ki-Eun; Lee, Byoung-Hee; Lee, Eun-Young; Park, Soo-Je.
Affiliation
  • Han B; Department of Biology, Jeju National University, 102 Jejudaehak-ro, Jeju 63243, Republic of Korea.
  • Kim M; Department of Biology, Jeju National University, 102 Jejudaehak-ro, Jeju 63243, Republic of Korea.
  • Lee KE; Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea.
  • Lee BH; Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea.
  • Lee EY; Exhibition & Education Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea.
  • Park SJ; Department of Biology, Jeju National University, 102 Jejudaehak-ro, Jeju 63243, Republic of Korea.
Int J Syst Evol Microbiol ; 70(3): 2008-2015, 2020 Mar.
Article in En | MEDLINE | ID: mdl-32228775
ABSTRACT
A novel bacterium, designated strain PS13T, was isolated from marine sediment collected from the coast of Jeju Island. Strain PS13T was a Gram stain-negative, catalase- and oxidase-positive, aerobic, yellow-pigmented, motile by gliding, and rod-shaped bacterium. Strain PS13T grew optimally at 25 °C and pH 8.0 and in the presence of 3 % (w/v) NaCl. Results of phylogenetic analysis based on 16S rRNA gene sequences showed that strain PS13T belonged to the genus Formosa and was closely related to Formosa algae KMM3553T (98.3 % sequence similarity). The DNA-DNA relatedness (17.3-21.8 %) and average nucleotide identity (83.6-84.6 %) values clearly indicated that strain PS13T represents a distinct species of the genus Formosa. The major fatty acids were C15  0 iso, C16  1 ω6c/C16  1 ω7c and C15  1 iso G. The genomic DNA G+C content of the strain PS13T was 32.2 mol%. On the basis of polyphasic characteristics, it is suggested that strain PS13T be assigned to the genus Formosa as the type strain of a novel species, for which the name Formosa sediminum PS13T (=KCCM 43301T=CECT 9918T) sp. nov. is proposed.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Phylogeny / Starch / Geologic Sediments / Flavobacteriaceae Country/Region as subject: Asia Language: En Journal: Int J Syst Evol Microbiol Journal subject: MICROBIOLOGIA Year: 2020 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Phylogeny / Starch / Geologic Sediments / Flavobacteriaceae Country/Region as subject: Asia Language: En Journal: Int J Syst Evol Microbiol Journal subject: MICROBIOLOGIA Year: 2020 Document type: Article