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Handling confounding variables in statistical shape analysis - application to cardiac remodelling.
Bernardino, Gabriel; Benkarim, Oualid; Sanz-de la Garza, María; Prat-Gonzàlez, Susanna; Sepulveda-Martinez, Alvaro; Crispi, Fátima; Sitges, Marta; Butakoff, Constantine; De Craene, Mathieu; Bijnens, Bart; González Ballester, Miguel A.
Affiliation
  • Bernardino G; BCN Medtech, Dept. of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain. Electronic address: gabriel.bernardino@upf.edu.
  • Benkarim O; McGill University, Montreal, Canada.
  • Sanz-de la Garza M; Cardiovascular Institute, Hospital Clínic, Barcelona, Spain; IDIBAPS, Barcelona, Spain.
  • Prat-Gonzàlez S; Cardiovascular Institute, Hospital Clínic, Barcelona, Spain; IDIBAPS, Barcelona, Spain.
  • Sepulveda-Martinez A; BCNatal, Hospital Clínic and Sant Joan de Déu, Universitat de Barcelona, Barcelona, Spain; Fetal Medicine Unit, Department of Obstetrics and Gynecology, Hospital Clínico de la Universidad de Chile, Santiago de Chile, Chile.
  • Crispi F; IDIBAPS, Barcelona, Spain; BCNatal, Hospital Clínic and Sant Joan de Déu, Universitat de Barcelona, Barcelona, Spain; CIBER-ER, Barcelona, Spain.
  • Sitges M; Cardiovascular Institute, Hospital Clínic, Barcelona, Spain; IDIBAPS, Barcelona, Spain; CIBER-CV, Barcelona, Spain.
  • Butakoff C; Barcelona Supercomputing Center, Barcelona, Spain.
  • De Craene M; Philips Research Paris, Paris, France.
  • Bijnens B; BCN Medtech, Dept. of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain; IDIBAPS, Barcelona, Spain; ICREA, Barcelona, Spain.
  • González Ballester MA; BCN Medtech, Dept. of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain; ICREA, Barcelona, Spain.
Med Image Anal ; 65: 101792, 2020 10.
Article in En | MEDLINE | ID: mdl-32712526
ABSTRACT
Statistical shape analysis is a powerful tool to assess organ morphologies and find shape changes associated to a particular disease. However, imbalance in confounding factors, such as demographics might invalidate the analysis if not taken into consideration. Despite the methodological advances in the field, providing new methods that are able to capture complex and regional shape differences, the relationship between non-imaging information and shape variability has been overlooked. We present a linear statistical shape analysis framework that finds shape differences unassociated to a controlled set of confounding variables. It includes two confounding correction

methods:

confounding deflation and adjustment. We applied our framework to a cardiac magnetic resonance imaging dataset, consisting of the cardiac ventricles of 89 triathletes and 77 controls, to identify cardiac remodelling due to the practice of endurance exercise. To test robustness to confounders, subsets of this dataset were generated by randomly removing controls with low body mass index, thus introducing imbalance. The analysis of the whole dataset indicates an increase of ventricular volumes and myocardial mass in athletes, which is consistent with the clinical literature. However, when confounders are not taken into consideration no increase of myocardial mass is found. Using the downsampled datasets, we find that confounder adjustment methods are needed to find the real remodelling patterns in imbalanced datasets.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Ventricular Remodeling / Heart Ventricles Type of study: Prognostic_studies Limits: Humans Language: En Journal: Med Image Anal Journal subject: DIAGNOSTICO POR IMAGEM Year: 2020 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Ventricular Remodeling / Heart Ventricles Type of study: Prognostic_studies Limits: Humans Language: En Journal: Med Image Anal Journal subject: DIAGNOSTICO POR IMAGEM Year: 2020 Document type: Article
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