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TRAKO: Efficient Transmission of Tractography Data for Visualization.
Haehn, Daniel; Franke, Loraine; Zhang, Fan; Cetin-Karayumak, Suheyla; Pieper, Steve; O'Donnell, Lauren J; Rathi, Yogesh.
Affiliation
  • Haehn D; University of Massachusetts Boston.
  • Franke L; University of Massachusetts Boston.
  • Zhang F; Harvard Medical School.
  • Cetin-Karayumak S; Harvard Medical School.
  • Pieper S; Isomics, Inc.
  • O'Donnell LJ; Harvard Medical School.
  • Rathi Y; Harvard Medical School.
Med Image Comput Comput Assist Interv ; 12267: 322-332, 2020 Oct.
Article in En | MEDLINE | ID: mdl-33135015
ABSTRACT
Fiber tracking produces large tractography datasets that are tens of gigabytes in size consisting of millions of streamlines. Such vast amounts of data require formats that allow for efficient storage, transfer, and visualization. We present TRAKO, a new data format based on the Graphics Layer Transmission Format (glTF) that enables immediate graphical and hardware-accelerated processing. We integrate a state-of-the-art compression technique for vertices, streamlines, and attached scalar and property data. We then compare TRAKO to existing tractography storage methods and provide a detailed evaluation on eight datasets. TRAKO can achieve data reductions of over 28x without loss of statistical significance when used to replicate analysis from previously published studies.
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Med Image Comput Comput Assist Interv Journal subject: DIAGNOSTICO POR IMAGEM / INFORMATICA MEDICA Year: 2020 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Med Image Comput Comput Assist Interv Journal subject: DIAGNOSTICO POR IMAGEM / INFORMATICA MEDICA Year: 2020 Document type: Article