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Targeting the initiation and termination codons of SARS-CoV-2 spike protein as possible therapy against COVID-19: the role of novel harpagide 5-O-ß-D-glucopyranoside from Clerodendrum volubile P Beauv. (Labiatae).
Erukainure, Ochuko L; Atolani, Olubunmi; Muhammad, Aliyu; Katsayal, Sanusi B; Ebhuoma, Osadolor O; Ibeji, Collins U; Mesaik, M Ahmed.
Affiliation
  • Erukainure OL; Department of Pharmacology, University of the Free State, Bloemfontein, South Africa.
  • Atolani O; Department of Chemistry, University of Ilorin, Ilorin, Nigeria.
  • Muhammad A; Department of Biochemistry, Ahmadu Bello University, Zaria, Nigeria.
  • Katsayal SB; Department of Biochemistry, Ahmadu Bello University, Zaria, Nigeria.
  • Ebhuoma OO; School of Agricultural, Earth and Environmental Sciences, University of KwaZulu-Natal, Durban, South Africa.
  • Ibeji CU; Department of Pure and Industrial Chemistry, University of Nigeria, Nsukka, Nigeria.
  • Mesaik MA; Dr. Panjwani Center for Molecular Medicine and Drug Research, International Center for Chemical and Biological Sciences, University of Karachi, Karachi, Pakistan.
J Biomol Struct Dyn ; 40(6): 2475-2488, 2022 04.
Article in En | MEDLINE | ID: mdl-33140706
The global spread of the coronavirus infections disease - 2019 (COVID-19) and the search for new drugs from natural products particularly from plants are receiving much attention recently. In this study, the therapeutic potential of a new iridoid glycoside isolated from the leaves of Clerodendrum volubile against COVID-19 was investigated. Harpagide 5-O-ß-D-glucopyranoside (HG) was isolated, characterised and investigated for its druglikeness, optimized geometry, and pharmacokinetics properties. Its immunomodulatory was determined by chemiluminescence assay using polymorphonuclear neutrophils (PMNs) in addition to T-cell proliferation assay. In silico analysis was used in determining its molecular interaction with severe acute respiratory syndrome coronavirus-2 (SARS-COV-2). HG displayed potent druglikeness properties, with no inhibitory effect on cytochrome P450 (1A2, 2C19, 2C9, 2D6 and 3A4) and a predicted LD50 of 2000 mg/kg. Its 1H-NMR chemical shifts showed a little deviation of 0.01 and 0.11 ppm for H-4 and H-9, respectively. HG significantly suppressed oxidative bursts in PMNs, while concomitantly inhibiting T-cell proliferation. It also displayed a very strong binding affinity with the translation initiation and termination sequence sites of spike (S) protein mRNA of SARS-COV-2, its gene product, and host ACE2 receptor. These results suggest the immunomodulatory properties and anti-SARS-COV-2 potentials of HG which can be explored in the treatment and management of COVID-19.Communicated by Ramaswamy H. Sarma.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Clerodendrum / Iridoid Glycosides / Spike Glycoprotein, Coronavirus / SARS-CoV-2 / Glucosides Limits: Humans Language: En Journal: J Biomol Struct Dyn Year: 2022 Document type: Article Affiliation country: South Africa Country of publication: United kingdom

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Clerodendrum / Iridoid Glycosides / Spike Glycoprotein, Coronavirus / SARS-CoV-2 / Glucosides Limits: Humans Language: En Journal: J Biomol Struct Dyn Year: 2022 Document type: Article Affiliation country: South Africa Country of publication: United kingdom