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Artificial intelligence for automatic cerebral ventricle segmentation and volume calculation: a clinical tool for the evaluation of pediatric hydrocephalus.
Quon, Jennifer L; Han, Michelle; Kim, Lily H; Koran, Mary Ellen; Chen, Leo C; Lee, Edward H; Wright, Jason; Ramaswamy, Vijay; Lober, Robert M; Taylor, Michael D; Grant, Gerald A; Cheshier, Samuel H; Kestle, John R W; Edwards, Michael S B; Yeom, Kristen W.
Affiliation
  • Quon JL; 1Department of Neurosurgery, Stanford University School of Medicine.
  • Han M; 2Stanford University School of Medicine.
  • Kim LH; 2Stanford University School of Medicine.
  • Koran ME; 3Department of Radiology, Stanford University School of Medicine.
  • Chen LC; 4Department of Urology, Stanford University School of Medicine.
  • Lee EH; 5Department of Electrical Engineering, Stanford University School of Engineering, Stanford, California.
  • Wright J; 6Department of Radiology, Seattle Children's Hospital, University of Washington School of Medicine, Seattle, Washington.
  • Ramaswamy V; 7Section of Neuro-Oncology, The Hospital for Sick Children, University of Toronto, Ontario, Canada.
  • Lober RM; 8Department of Neurosurgery, Dayton Children's Hospital, Wright State University Boonshoft School of Medicine, Dayton, Ohio.
  • Taylor MD; 9Division of Neurosurgery, The Hospital for Sick Children, University of Toronto, Ontario, Canada.
  • Grant GA; 1Department of Neurosurgery, Stanford University School of Medicine.
  • Cheshier SH; Divisions of11Pediatric Neurosurgery and.
  • Kestle JRW; 10Department of Neurosurgery, University of Utah School of Medicine, Salt Lake City, Utah; and.
  • Edwards MSB; 10Department of Neurosurgery, University of Utah School of Medicine, Salt Lake City, Utah; and.
  • Yeom KW; 1Department of Neurosurgery, Stanford University School of Medicine.
J Neurosurg Pediatr ; 27(2): 131-138, 2020 Dec 01.
Article in En | MEDLINE | ID: mdl-33260138
OBJECTIVE: Imaging evaluation of the cerebral ventricles is important for clinical decision-making in pediatric hydrocephalus. Although quantitative measurements of ventricular size, over time, can facilitate objective comparison, automated tools for calculating ventricular volume are not structured for clinical use. The authors aimed to develop a fully automated deep learning (DL) model for pediatric cerebral ventricle segmentation and volume calculation for widespread clinical implementation across multiple hospitals. METHODS: The study cohort consisted of 200 children with obstructive hydrocephalus from four pediatric hospitals, along with 199 controls. Manual ventricle segmentation and volume calculation values served as "ground truth" data. An encoder-decoder convolutional neural network architecture, in which T2-weighted MR images were used as input, automatically delineated the ventricles and output volumetric measurements. On a held-out test set, segmentation accuracy was assessed using the Dice similarity coefficient (0 to 1) and volume calculation was assessed using linear regression. Model generalizability was evaluated on an external MRI data set from a fifth hospital. The DL model performance was compared against FreeSurfer research segmentation software. RESULTS: Model segmentation performed with an overall Dice score of 0.901 (0.946 in hydrocephalus, 0.856 in controls). The model generalized to external MR images from a fifth pediatric hospital with a Dice score of 0.926. The model was more accurate than FreeSurfer, with faster operating times (1.48 seconds per scan). CONCLUSIONS: The authors present a DL model for automatic ventricle segmentation and volume calculation that is more accurate and rapid than currently available methods. With near-immediate volumetric output and reliable performance across institutional scanner types, this model can be adapted to the real-time clinical evaluation of hydrocephalus and improve clinician workflow.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Artificial Intelligence / Cerebral Ventricles / Hydrocephalus Type of study: Etiology_studies / Guideline / Incidence_studies / Observational_studies / Prognostic_studies / Risk_factors_studies Limits: Adolescent / Adult / Child / Child, preschool / Female / Humans / Infant / Male / Newborn Language: En Journal: J Neurosurg Pediatr Journal subject: NEUROCIRURGIA / PEDIATRIA Year: 2020 Document type: Article Country of publication: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Artificial Intelligence / Cerebral Ventricles / Hydrocephalus Type of study: Etiology_studies / Guideline / Incidence_studies / Observational_studies / Prognostic_studies / Risk_factors_studies Limits: Adolescent / Adult / Child / Child, preschool / Female / Humans / Infant / Male / Newborn Language: En Journal: J Neurosurg Pediatr Journal subject: NEUROCIRURGIA / PEDIATRIA Year: 2020 Document type: Article Country of publication: United States