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Subgenomic RNA identification in SARS-CoV-2 genomic sequencing data.
Parker, Matthew D; Lindsey, Benjamin B; Leary, Shay; Gaudieri, Silvana; Chopra, Abha; Wyles, Matthew; Angyal, Adrienn; Green, Luke R; Parsons, Paul; Tucker, Rachel M; Brown, Rebecca; Groves, Danielle; Johnson, Katie; Carrilero, Laura; Heffer, Joe; Partridge, David G; Evans, Cariad; Raza, Mohammad; Keeley, Alexander J; Smith, Nikki; Filipe, Ana Da Silva; Shepherd, James G; Davis, Chris; Bennett, Sahan; Sreenu, Vattipally B; Kohl, Alain; Aranday-Cortes, Elihu; Tong, Lily; Nichols, Jenna; Thomson, Emma C; Wang, Dennis; Mallal, Simon; de Silva, Thushan I.
Affiliation
  • Parker MD; Sheffield Bioinformatics Core, The University of Sheffield, Sheffield S10 2HQ, United Kingdom.
  • Lindsey BB; Sheffield Institute for Translational Neuroscience, The University of Sheffield, Sheffield S10 2HQ, United Kingdom.
  • Leary S; Sheffield Biomedical Research Centre, The University of Sheffield, Sheffield S10 2JF, United Kingdom.
  • Gaudieri S; Sheffield Teaching Hospitals NHS Foundation Trust, Department of Virology/Microbiology, Sheffield S10 2JF, United Kingdom.
  • Chopra A; The Florey Institute for Host-Pathogen Interactions and Department of Infection, Immunity and Cardiovascular Disease, Medical School, University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Wyles M; Institute for Immunology and Infectious Diseases, Murdoch University, Murdoch WA 6150, Western Australia, Australia.
  • Angyal A; Institute for Immunology and Infectious Diseases, Murdoch University, Murdoch WA 6150, Western Australia, Australia.
  • Green LR; Division of Infectious Diseases, Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee 37232, USA.
  • Parsons P; School of Human Sciences, University of Western Australia, Crawley WA 6009, Western Australia, Australia.
  • Tucker RM; Institute for Immunology and Infectious Diseases, Murdoch University, Murdoch WA 6150, Western Australia, Australia.
  • Brown R; Sheffield Institute for Translational Neuroscience, The University of Sheffield, Sheffield S10 2HQ, United Kingdom.
  • Groves D; The Florey Institute for Host-Pathogen Interactions and Department of Infection, Immunity and Cardiovascular Disease, Medical School, University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Johnson K; The Florey Institute for Host-Pathogen Interactions and Department of Infection, Immunity and Cardiovascular Disease, Medical School, University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Carrilero L; Department of Animal and Plant Sciences, The University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Heffer J; Department of Animal and Plant Sciences, The University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Partridge DG; The Florey Institute for Host-Pathogen Interactions and Department of Infection, Immunity and Cardiovascular Disease, Medical School, University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Evans C; The Florey Institute for Host-Pathogen Interactions and Department of Infection, Immunity and Cardiovascular Disease, Medical School, University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Raza M; Sheffield Teaching Hospitals NHS Foundation Trust, Department of Virology/Microbiology, Sheffield S10 2JF, United Kingdom.
  • Keeley AJ; Department of Animal and Plant Sciences, The University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Smith N; IT Services, The University of Sheffield, Sheffield S10 2FN, United Kingdom.
  • Filipe ADS; Sheffield Teaching Hospitals NHS Foundation Trust, Department of Virology/Microbiology, Sheffield S10 2JF, United Kingdom.
  • Shepherd JG; The Florey Institute for Host-Pathogen Interactions and Department of Infection, Immunity and Cardiovascular Disease, Medical School, University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Davis C; Sheffield Teaching Hospitals NHS Foundation Trust, Department of Virology/Microbiology, Sheffield S10 2JF, United Kingdom.
  • Bennett S; Sheffield Teaching Hospitals NHS Foundation Trust, Department of Virology/Microbiology, Sheffield S10 2JF, United Kingdom.
  • Sreenu VB; Sheffield Teaching Hospitals NHS Foundation Trust, Department of Virology/Microbiology, Sheffield S10 2JF, United Kingdom.
  • Kohl A; The Florey Institute for Host-Pathogen Interactions and Department of Infection, Immunity and Cardiovascular Disease, Medical School, University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Aranday-Cortes E; The Florey Institute for Host-Pathogen Interactions and Department of Infection, Immunity and Cardiovascular Disease, Medical School, University of Sheffield, Sheffield S10 2TN, United Kingdom.
  • Tong L; Centre for Virus Research, The University of Glasgow, Glasgow G61 1QH, United Kingdom.
  • Nichols J; Centre for Virus Research, The University of Glasgow, Glasgow G61 1QH, United Kingdom.
  • Thomson EC; Centre for Virus Research, The University of Glasgow, Glasgow G61 1QH, United Kingdom.
  • Wang D; Centre for Virus Research, The University of Glasgow, Glasgow G61 1QH, United Kingdom.
  • Mallal S; Centre for Virus Research, The University of Glasgow, Glasgow G61 1QH, United Kingdom.
  • de Silva TI; Centre for Virus Research, The University of Glasgow, Glasgow G61 1QH, United Kingdom.
Genome Res ; 31(4): 645-658, 2021 04.
Article in En | MEDLINE | ID: mdl-33722935
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: RNA, Viral / Genome, Viral / Sequence Analysis, RNA / SARS-CoV-2 Type of study: Diagnostic_studies / Prognostic_studies Limits: Animals / Humans Language: En Journal: Genome Res Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2021 Document type: Article Affiliation country: United kingdom
Fulltext
Add to My VHL
Print
XML
PubMed Links
Search on Google

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: RNA, Viral / Genome, Viral / Sequence Analysis, RNA / SARS-CoV-2 Type of study: Diagnostic_studies / Prognostic_studies Limits: Animals / Humans Language: En Journal: Genome Res Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2021 Document type: Article Affiliation country: United kingdom