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Deep neural network for automated simultaneous intervertebral disc (IVDs) identification and segmentation of multi-modal MR images.
Das, Pabitra; Pal, Chandrajit; Acharyya, Amit; Chakrabarti, Amlan; Basu, Saumyajit.
Affiliation
  • Das P; A.K.Choudhury School of Information Technology, University of Calcutta, Kolkata 700106, India. Electronic address: pdakc_rs@caluniv.ac.in.
  • Pal C; Advanced Embedded System and IC Design Laboratory, Department of Electrical Engineering, Indian Institute of Technology Hyderabad, India.
  • Acharyya A; Advanced Embedded System and IC Design Laboratory, Department of Electrical Engineering, Indian Institute of Technology Hyderabad, India.
  • Chakrabarti A; A.K.Choudhury School of Information Technology, University of Calcutta, Kolkata 700106, India.
  • Basu S; Kothari Medical Centre, 8/3, Alipore Rd, Alipore, Kolkata 700027, India.
Comput Methods Programs Biomed ; 205: 106074, 2021 Jun.
Article in En | MEDLINE | ID: mdl-33906011
ABSTRACT
BACKGROUND AND

OBJECTIVE:

Lower back pain in humans has become a major risk. Classical approaches follow a non-invasive imaging technique for the assessment of spinal intervertebral disc (IVDs) abnormalities, where identification and segmentation of discs are done separately, making it a time-consuming phenomenon. This necessitates designing a robust automated and simultaneous IVDs identification and segmentation of multi-modality MRI images.

METHODS:

We introduced a novel deep neural network architecture coined as 'RIMNet', a Region-to-Image Matching Network model, capable of performing an automated and simultaneous IVDs identification and segmentation of MRI images. The multi-modal input data is being fed to the network with a dropout strategy, by randomly disabling modalities in mini-batches. The performance accuracy as a function of the testing dataset was determined. The execution of the deep neural network model was evaluated by computing the IVDs Identification Accuracy, Dice coefficient, MDOC, Average Symmetric Surface Distance, Jaccard Coefficient, Hausdorff Distance and F1 Score.

RESULTS:

Proposed model has attained 94% identification accuracy, dice coefficient value of 91.7±1% in segmentation and MDOC 90.2±1%. Our model also achieved 0.87±0.02 for Jaccard Coefficient, 0.54±0.04 for ASD and 0.62±0.02 mm Hausdorff Distance. The results have been validated and compared with other methodologies on dataset of MICCAI IVD 2018 challenge.

CONCLUSIONS:

Our proposed deep-learning methodology is capable of performing simultaneous identification and segmentation on IVDs MRI images of the human spine with high accuracy.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Image Processing, Computer-Assisted / Intervertebral Disc Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: Comput Methods Programs Biomed Journal subject: INFORMATICA MEDICA Year: 2021 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Image Processing, Computer-Assisted / Intervertebral Disc Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: Comput Methods Programs Biomed Journal subject: INFORMATICA MEDICA Year: 2021 Document type: Article