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Comparative genomic analysis reveals metabolic flexibility of Woesearchaeota.
Huang, Wen-Cong; Liu, Yang; Zhang, Xinxu; Zhang, Cui-Jing; Zou, Dayu; Zheng, Shiling; Xu, Wei; Luo, Zhuhua; Liu, Fanghua; Li, Meng.
Affiliation
  • Huang WC; Shenzhen Key Laboratory of Marine Microbiome Engineering, Institute for Advanced Study, Shenzhen University, Shenzhen, China.
  • Liu Y; Shenzhen Key Laboratory of Marine Microbiome Engineering, Institute for Advanced Study, Shenzhen University, Shenzhen, China.
  • Zhang X; Shenzhen Key Laboratory of Marine Microbiome Engineering, Institute for Advanced Study, Shenzhen University, Shenzhen, China.
  • Zhang CJ; Shenzhen Key Laboratory of Marine Microbiome Engineering, Institute for Advanced Study, Shenzhen University, Shenzhen, China.
  • Zou D; Shenzhen Key Laboratory of Marine Microbiome Engineering, Institute for Advanced Study, Shenzhen University, Shenzhen, China.
  • Zheng S; Department of Ocean Science, The Hong Kong University of Science and Technology, Hong Kong, China.
  • Xu W; Key Laboratory of Coastal Biology and Biological Resources Utilization, CAS Key Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China.
  • Luo Z; Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen, China.
  • Liu F; Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen, China.
  • Li M; School of Marine Sciences, Nanjing University of Information Science & Technology, Nanjing, China.
Nat Commun ; 12(1): 5281, 2021 09 06.
Article in En | MEDLINE | ID: mdl-34489402
ABSTRACT
The archaeal phylum Woesearchaeota, within the DPANN superphylum, includes phylogenetically diverse microorganisms that inhabit various environments. Their biology is poorly understood due to the lack of cultured isolates. Here, we analyze datasets of Woesearchaeota 16S rRNA gene sequences and metagenome-assembled genomes to infer global distribution patterns, ecological preferences and metabolic capabilities. Phylogenomic analyses indicate that the phylum can be classified into ten subgroups, termed A-J. While a symbiotic lifestyle is predicted for most, some members of subgroup J might be host-independent. The genomes of several Woesearchaeota, including subgroup J, encode putative [FeFe] hydrogenases (known to be important for fermentation in other organisms), suggesting that these archaea might be anaerobic fermentative heterotrophs.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: RNA, Ribosomal, 16S / Archaea / Archaeal Proteins / RNA, Archaeal / Genome, Archaeal / Hydrogenase Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2021 Document type: Article Affiliation country: China

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: RNA, Ribosomal, 16S / Archaea / Archaeal Proteins / RNA, Archaeal / Genome, Archaeal / Hydrogenase Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2021 Document type: Article Affiliation country: China
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