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Genetic and epigenetic basis of hepatoblastoma diversity.
Nagae, Genta; Yamamoto, Shogo; Fujita, Masashi; Fujita, Takanori; Nonaka, Aya; Umeda, Takayoshi; Fukuda, Shiro; Tatsuno, Kenji; Maejima, Kazuhiro; Hayashi, Akimasa; Kurihara, Sho; Kojima, Masato; Hishiki, Tomoro; Watanabe, Kenichiro; Ida, Kohmei; Yano, Michihiro; Hiyama, Yoko; Tanaka, Yukichi; Inoue, Takeshi; Ueda, Hiroki; Nakagawa, Hidewaki; Aburatani, Hiroyuki; Hiyama, Eiso.
Affiliation
  • Nagae G; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
  • Yamamoto S; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
  • Fujita M; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
  • Fujita T; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
  • Nonaka A; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
  • Umeda T; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
  • Fukuda S; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
  • Tatsuno K; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
  • Maejima K; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
  • Hayashi A; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
  • Kurihara S; Department of Pathology, Kyorin University Faculty of Medicine, Tokyo, Japan.
  • Kojima M; Department of Pediatric Surgery, Hiroshima University Hospital, Hiroshima, Japan.
  • Hishiki T; Department of Pediatric Surgery, Hiroshima University Hospital, Hiroshima, Japan.
  • Watanabe K; Chiba University Graduate School of Medicine, Chiba, Japan.
  • Ida K; Shizuoka Children's Hospital, Shizuoka, Japan.
  • Yano M; Department of Pediatrics, Teikyo University Mizonokuchi Hospital, Kawasaki, Japan.
  • Hiyama Y; Department of Pediatrics, Akita University Hospital, Akita, Japan.
  • Tanaka Y; Department of Biomedical Science, Natural Science Center for Basic Research and Development, Hiroshima University, Hiroshima, Japan, 734-8551, 1-2-3, Kasumi, Minami-ku, Hiroshima.
  • Inoue T; Department of Pathology, Kanagawa Children's Medical Center, Yokohama, Japan.
  • Ueda H; Department of Pathology, Osaka City General Hospital, Osaka, Japan.
  • Nakagawa H; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
  • Aburatani H; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
  • Hiyama E; Genome Science Laboratory, Research Center for Advanced Science and Technology (RCAST), the University of Tokyo, Tokyo, Japan.
Nat Commun ; 12(1): 5423, 2021 09 20.
Article in En | MEDLINE | ID: mdl-34538872
ABSTRACT
Hepatoblastoma (HB) is the most common pediatric liver malignancy; however, hereditary predisposition and acquired molecular aberrations related to HB clinicopathological diversity are not well understood. Here, we perform an integrative genomic profiling of 163 pediatric liver tumors (154 HBs and nine hepatocellular carcinomas) based on the data acquired from a cohort study (JPLT-2). The total number of somatic mutations is precious low (0.52/Mb on exonic regions) but correlated with age at diagnosis. Telomerase reverse transcriptase (TERT) promoter mutations are prevalent in the tween HBs, selective in the transitional liver cell tumor (TLCT, > 8 years old). DNA methylation profiling reveals that classical HBs are characterized by the specific hypomethylated enhancers, which are enriched with binding sites for ASCL2, a regulatory transcription factor for definitive endoderm in Wnt-pathway. Prolonged upregulation of ASCL2, as well as fetal-liver-like methylation patterns of IGF2 promoters, suggests their "cell of origin" derived from the premature hepatoblast, similar to intestinal epithelial cells, which are highly proliferative. Systematic molecular profiling of HB is a promising approach for understanding the epigenetic drivers of hepatoblast carcinogenesis and deriving clues for risk stratification.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Gene Expression Regulation, Neoplastic / Hepatoblastoma / DNA Methylation / Epigenesis, Genetic / Liver Neoplasms Type of study: Etiology_studies / Incidence_studies / Observational_studies / Risk_factors_studies Limits: Child, preschool / Female / Humans / Infant / Male Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2021 Document type: Article Affiliation country: Japan

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Gene Expression Regulation, Neoplastic / Hepatoblastoma / DNA Methylation / Epigenesis, Genetic / Liver Neoplasms Type of study: Etiology_studies / Incidence_studies / Observational_studies / Risk_factors_studies Limits: Child, preschool / Female / Humans / Infant / Male Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2021 Document type: Article Affiliation country: Japan
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