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Semantic segmentation of multispectral photoacoustic images using deep learning.
Schellenberg, Melanie; Dreher, Kris K; Holzwarth, Niklas; Isensee, Fabian; Reinke, Annika; Schreck, Nicholas; Seitel, Alexander; Tizabi, Minu D; Maier-Hein, Lena; Gröhl, Janek.
Affiliation
  • Schellenberg M; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center (DKFZ), Heidelberg, Germany.
  • Dreher KK; Faculty of Mathematics and Computer Science, Heidelberg University, Heidelberg, Germany.
  • Holzwarth N; HIDSS4Health - Helmholtz Information and Data Science School for Health, Heidelberg, Germany.
  • Isensee F; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center (DKFZ), Heidelberg, Germany.
  • Reinke A; Faculty of Physics and Astronomy, Heidelberg University, Heidelberg, Germany.
  • Schreck N; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center (DKFZ), Heidelberg, Germany.
  • Seitel A; HI Applied Computer Vision Lab, Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg, Germany.
  • Tizabi MD; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center (DKFZ), Heidelberg, Germany.
  • Maier-Hein L; Faculty of Mathematics and Computer Science, Heidelberg University, Heidelberg, Germany.
  • Gröhl J; HI Applied Computer Vision Lab, Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Photoacoustics ; 26: 100341, 2022 Jun.
Article in En | MEDLINE | ID: mdl-35371919
ABSTRACT
Photoacoustic (PA) imaging has the potential to revolutionize functional medical imaging in healthcare due to the valuable information on tissue physiology contained in multispectral photoacoustic measurements. Clinical translation of the technology requires conversion of the high-dimensional acquired data into clinically relevant and interpretable information. In this work, we present a deep learning-based approach to semantic segmentation of multispectral photoacoustic images to facilitate image interpretability. Manually annotated photoacoustic and ultrasound imaging data are used as reference and enable the training of a deep learning-based segmentation algorithm in a supervised manner. Based on a validation study with experimentally acquired data from 16 healthy human volunteers, we show that automatic tissue segmentation can be used to create powerful analyses and visualizations of multispectral photoacoustic images. Due to the intuitive representation of high-dimensional information, such a preprocessing algorithm could be a valuable means to facilitate the clinical translation of photoacoustic imaging.
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Photoacoustics Year: 2022 Document type: Article Affiliation country: Germany

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Photoacoustics Year: 2022 Document type: Article Affiliation country: Germany