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Effect of encapsulated protein on the dynamics of lipid sponge phase: a neutron spin echo and molecular dynamics simulation study.
Gilbert, Jennifer; Ermilova, Inna; Nagao, Michihiro; Swenson, Jan; Nylander, Tommy.
Affiliation
  • Gilbert J; Division of Physical Chemistry, Department of Chemistry, Naturvetarvägen 14, Lund University, 22362 Lund, Sweden. tommy.nylander@fkem1.lu.se.
  • Ermilova I; NanoLund, Lund University, Professorsgatan 1, 223 63 Lund, Sweden.
  • Nagao M; Department of Physics, Chalmers University of Technology, 412 96 Gothenburg, Sweden.
  • Swenson J; NIST Center for Neutron Research, National Institute of Standards and Technology, Gaithersburg, Maryland 20899, USA.
  • Nylander T; Department of Materials Science and Engineering, University of Maryland, College Park, Maryland 20742, USA.
Nanoscale ; 14(18): 6990-7002, 2022 May 16.
Article in En | MEDLINE | ID: mdl-35470842
Lipid membranes are highly mobile systems with hierarchical, time and length scale dependent, collective motions including thickness fluctuations, undulations, and topological membrane changes, which play an important role in membrane interactions. In this work we have characterised the effect of encapsulating two industrially important enzymes, ß-galactosidase and aspartic protease, in lipid sponge phase nanoparticles on the dynamics of the lipid membrane using neutron spin echo (NSE) spectroscopy and molecular dynamics (MD) simulations. From NSE, reduced membrane dynamics were observed upon enzyme encapsulation, which were dependent on the enzyme concentration and type. By fitting the intermediate scattering functions (ISFs) with a modified Zilman and Granek model including nanoparticle diffusion, an increase in membrane bending rigidity was observed, with a larger effect for ß-galactosidase than aspartic protease at the same concentration. MD simulations for the system with and without aspartic protease showed that the lipids relax more slowly in the system with protein due to the replacement of the lipid carbonyl-water hydrogen bonds with lipid-protein hydrogen bonds. This indicates that the most likely cause of the increase in membrane rigidity observed in the NSE measurements was dehydration of the lipid head groups. The dynamics of the protein itself were also studied, which showed a stable secondary structure of protein over the simulation, indicating no unfolding events occurred.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Molecular Dynamics Simulation / Neutrons Language: En Journal: Nanoscale Year: 2022 Document type: Article Affiliation country: Sweden Country of publication: United kingdom

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Molecular Dynamics Simulation / Neutrons Language: En Journal: Nanoscale Year: 2022 Document type: Article Affiliation country: Sweden Country of publication: United kingdom